Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sfr1Q8BP27 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sfr1Q8BP27 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.15■□□□□ 0.5
Sfr1Q8BP27 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.15■□□□□ 0.5
Sfr1Q8BP27 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sfr1Q8BP27 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sfr1Q8BP27 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.15■□□□□ 0.5
Sfr1Q8BP27 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.15■□□□□ 0.5
Sfr1Q8BP27 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sfr1Q8BP27 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Sfr1Q8BP27 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.15■□□□□ 0.5
Sfr1Q8BP27 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
Sfr1Q8BP27 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sfr1Q8BP27 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Sfr1Q8BP27 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sfr1Q8BP27 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sfr1Q8BP27 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.15■□□□□ 0.5
Sfr1Q8BP27 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sfr1Q8BP27 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.14■□□□□ 0.49
Sfr1Q8BP27 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sfr1Q8BP27 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sfr1Q8BP27 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sfr1Q8BP27 Gm27011-201ENSMUST00000182352 972 ntBASIC18.14■□□□□ 0.49
Sfr1Q8BP27 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Sfr1Q8BP27 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sfr1Q8BP27 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Sfr1Q8BP27 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sfr1Q8BP27 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sfr1Q8BP27 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sfr1Q8BP27 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sfr1Q8BP27 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sfr1Q8BP27 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sfr1Q8BP27 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sfr1Q8BP27 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sfr1Q8BP27 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Sfr1Q8BP27 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.13■□□□□ 0.49
Sfr1Q8BP27 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sfr1Q8BP27 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sfr1Q8BP27 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sfr1Q8BP27 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sfr1Q8BP27 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sfr1Q8BP27 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sfr1Q8BP27 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sfr1Q8BP27 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sfr1Q8BP27 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sfr1Q8BP27 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sfr1Q8BP27 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sfr1Q8BP27 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sfr1Q8BP27 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sfr1Q8BP27 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sfr1Q8BP27 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.12■□□□□ 0.49
Sfr1Q8BP27 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Sfr1Q8BP27 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sfr1Q8BP27 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sfr1Q8BP27 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.12■□□□□ 0.49
Sfr1Q8BP27 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.12■□□□□ 0.49
Sfr1Q8BP27 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.12■□□□□ 0.49
Sfr1Q8BP27 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sfr1Q8BP27 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Sfr1Q8BP27 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sfr1Q8BP27 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sfr1Q8BP27 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Sfr1Q8BP27 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sfr1Q8BP27 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sfr1Q8BP27 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sfr1Q8BP27 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sfr1Q8BP27 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Sfr1Q8BP27 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sfr1Q8BP27 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sfr1Q8BP27 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.11■□□□□ 0.49
Sfr1Q8BP27 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sfr1Q8BP27 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sfr1Q8BP27 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sfr1Q8BP27 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Sfr1Q8BP27 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sfr1Q8BP27 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.11■□□□□ 0.49
Sfr1Q8BP27 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sfr1Q8BP27 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Sfr1Q8BP27 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sfr1Q8BP27 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sfr1Q8BP27 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sfr1Q8BP27 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sfr1Q8BP27 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sfr1Q8BP27 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sfr1Q8BP27 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sfr1Q8BP27 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sfr1Q8BP27 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sfr1Q8BP27 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sfr1Q8BP27 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sfr1Q8BP27 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sfr1Q8BP27 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sfr1Q8BP27 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sfr1Q8BP27 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sfr1Q8BP27 Gm13158-201ENSMUST00000122007 736 ntBASIC18.1■□□□□ 0.49
Sfr1Q8BP27 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.1■□□□□ 0.49
Sfr1Q8BP27 Gm18666-201ENSMUST00000190039 958 ntBASIC18.1■□□□□ 0.49
Sfr1Q8BP27 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Sfr1Q8BP27 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.1■□□□□ 0.49
Sfr1Q8BP27 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.09■□□□□ 0.49
Sfr1Q8BP27 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms