Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf18Q8BM39 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf18Q8BM39 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf18Q8BM39 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Prpf18Q8BM39 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf18Q8BM39 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf18Q8BM39 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf18Q8BM39 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf18Q8BM39 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf18Q8BM39 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf18Q8BM39 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf18Q8BM39 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf18Q8BM39 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf18Q8BM39 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17■□□□□ 0.31
Prpf18Q8BM39 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17■□□□□ 0.31
Prpf18Q8BM39 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17■□□□□ 0.31
Prpf18Q8BM39 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf18Q8BM39 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17■□□□□ 0.31
Prpf18Q8BM39 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf18Q8BM39 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17■□□□□ 0.31
Prpf18Q8BM39 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prpf18Q8BM39 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf18Q8BM39 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf18Q8BM39 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Prpf18Q8BM39 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Prpf18Q8BM39 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf18Q8BM39 Gm21168-201ENSMUST00000199646 1096 ntBASIC17■□□□□ 0.31
Prpf18Q8BM39 Gm2011-201ENSMUST00000203124 1263 ntBASIC17■□□□□ 0.31
Prpf18Q8BM39 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prpf18Q8BM39 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Prpf18Q8BM39 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf18Q8BM39 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf18Q8BM39 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf18Q8BM39 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf18Q8BM39 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf18Q8BM39 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Prpf18Q8BM39 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf18Q8BM39 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf18Q8BM39 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prpf18Q8BM39 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf18Q8BM39 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.99■□□□□ 0.31
Prpf18Q8BM39 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Prpf18Q8BM39 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf18Q8BM39 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Prpf18Q8BM39 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf18Q8BM39 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf18Q8BM39 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf18Q8BM39 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Prpf18Q8BM39 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.98■□□□□ 0.31
Prpf18Q8BM39 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.98■□□□□ 0.31
Prpf18Q8BM39 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf18Q8BM39 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf18Q8BM39 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf18Q8BM39 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf18Q8BM39 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf18Q8BM39 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf18Q8BM39 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf18Q8BM39 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf18Q8BM39 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf18Q8BM39 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf18Q8BM39 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf18Q8BM39 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf18Q8BM39 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf18Q8BM39 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf18Q8BM39 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf18Q8BM39 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf18Q8BM39 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf18Q8BM39 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf18Q8BM39 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf18Q8BM39 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf18Q8BM39 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf18Q8BM39 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf18Q8BM39 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Prpf18Q8BM39 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms