Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC23.62■■□□□ 1.37
Col16a1Q8BLX7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC23.62■■□□□ 1.37
Col16a1Q8BLX7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col16a1Q8BLX7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col16a1Q8BLX7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col16a1Q8BLX7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col16a1Q8BLX7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col16a1Q8BLX7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col16a1Q8BLX7 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col16a1Q8BLX7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC23.61■■□□□ 1.37
Col16a1Q8BLX7 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col16a1Q8BLX7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Col16a1Q8BLX7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Col16a1Q8BLX7 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC23.61■■□□□ 1.37
Col16a1Q8BLX7 Gm13474-201ENSMUST00000122466 815 ntBASIC23.61■■□□□ 1.37
Col16a1Q8BLX7 Gm18669-201ENSMUST00000216049 778 ntBASIC23.61■■□□□ 1.37
Col16a1Q8BLX7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col16a1Q8BLX7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Col16a1Q8BLX7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Col16a1Q8BLX7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Col16a1Q8BLX7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Col16a1Q8BLX7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Col16a1Q8BLX7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Col16a1Q8BLX7 Gm17808-201ENSMUST00000200859 894 ntBASIC23.6■■□□□ 1.37
Col16a1Q8BLX7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
Col16a1Q8BLX7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Col16a1Q8BLX7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Col16a1Q8BLX7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Col16a1Q8BLX7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col16a1Q8BLX7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col16a1Q8BLX7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col16a1Q8BLX7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col16a1Q8BLX7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Col16a1Q8BLX7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col16a1Q8BLX7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col16a1Q8BLX7 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Col16a1Q8BLX7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col16a1Q8BLX7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC23.59■■□□□ 1.37
Col16a1Q8BLX7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col16a1Q8BLX7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC23.59■■□□□ 1.37
Col16a1Q8BLX7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col16a1Q8BLX7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Col16a1Q8BLX7 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC23.58■■□□□ 1.37
Col16a1Q8BLX7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Col16a1Q8BLX7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC23.58■■□□□ 1.37
Col16a1Q8BLX7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Col16a1Q8BLX7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Col16a1Q8BLX7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Col16a1Q8BLX7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.36
Col16a1Q8BLX7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Col16a1Q8BLX7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
Col16a1Q8BLX7 Gm7153-201ENSMUST00000117092 455 ntBASIC23.57■■□□□ 1.36
Col16a1Q8BLX7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col16a1Q8BLX7 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC23.57■■□□□ 1.36
Col16a1Q8BLX7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col16a1Q8BLX7 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col16a1Q8BLX7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col16a1Q8BLX7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Col16a1Q8BLX7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Col16a1Q8BLX7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col16a1Q8BLX7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col16a1Q8BLX7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC23.57■■□□□ 1.36
Col16a1Q8BLX7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col16a1Q8BLX7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC23.57■■□□□ 1.36
Col16a1Q8BLX7 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Col16a1Q8BLX7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Col16a1Q8BLX7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col16a1Q8BLX7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col16a1Q8BLX7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col16a1Q8BLX7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col16a1Q8BLX7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Col16a1Q8BLX7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Col16a1Q8BLX7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Col16a1Q8BLX7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC23.56■■□□□ 1.36
Col16a1Q8BLX7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Col16a1Q8BLX7 Gm9731-201ENSMUST00000209480 747 ntBASIC23.56■■□□□ 1.36
Col16a1Q8BLX7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Col16a1Q8BLX7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Col16a1Q8BLX7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col16a1Q8BLX7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Col16a1Q8BLX7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Col16a1Q8BLX7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Col16a1Q8BLX7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Col16a1Q8BLX7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC23.55■■□□□ 1.36
Col16a1Q8BLX7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col16a1Q8BLX7 Gm27357-201ENSMUST00000183754 135 ntBASIC23.54■■□□□ 1.36
Col16a1Q8BLX7 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Col16a1Q8BLX7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Col16a1Q8BLX7 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col16a1Q8BLX7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col16a1Q8BLX7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Col16a1Q8BLX7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col16a1Q8BLX7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col16a1Q8BLX7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col16a1Q8BLX7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col16a1Q8BLX7 Spsb2-203ENSMUST00000112473 1322 ntBASIC23.53■■□□□ 1.36
Col16a1Q8BLX7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Col16a1Q8BLX7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col16a1Q8BLX7 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col16a1Q8BLX7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms