Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nop53Q8BK35 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nop53Q8BK35 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.16■□□□□ 0.66
Nop53Q8BK35 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nop53Q8BK35 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.16■□□□□ 0.66
Nop53Q8BK35 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Nop53Q8BK35 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nop53Q8BK35 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Nop53Q8BK35 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.16■□□□□ 0.66
Nop53Q8BK35 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Tgds-204ENSMUST00000228543 1594 ntBASIC19.15■□□□□ 0.66
Nop53Q8BK35 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.15■□□□□ 0.66
Nop53Q8BK35 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nop53Q8BK35 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nop53Q8BK35 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Nop53Q8BK35 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nop53Q8BK35 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Nop53Q8BK35 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.14■□□□□ 0.65
Nop53Q8BK35 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Nop53Q8BK35 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nop53Q8BK35 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nop53Q8BK35 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nop53Q8BK35 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nop53Q8BK35 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nop53Q8BK35 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nop53Q8BK35 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop53Q8BK35 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Nop53Q8BK35 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nop53Q8BK35 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop53Q8BK35 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop53Q8BK35 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop53Q8BK35 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
Nop53Q8BK35 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nop53Q8BK35 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.13■□□□□ 0.65
Nop53Q8BK35 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.13■□□□□ 0.65
Nop53Q8BK35 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop53Q8BK35 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop53Q8BK35 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nop53Q8BK35 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop53Q8BK35 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop53Q8BK35 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nop53Q8BK35 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Nop53Q8BK35 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.12■□□□□ 0.65
Nop53Q8BK35 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nop53Q8BK35 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Nop53Q8BK35 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nop53Q8BK35 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nop53Q8BK35 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nop53Q8BK35 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nop53Q8BK35 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Nop53Q8BK35 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nop53Q8BK35 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nop53Q8BK35 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nop53Q8BK35 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nop53Q8BK35 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nop53Q8BK35 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.11■□□□□ 0.65
Nop53Q8BK35 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nop53Q8BK35 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Nop53Q8BK35 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Nop53Q8BK35 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nop53Q8BK35 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Nop53Q8BK35 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nop53Q8BK35 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nop53Q8BK35 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.11■□□□□ 0.65
Nop53Q8BK35 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nop53Q8BK35 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nop53Q8BK35 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nop53Q8BK35 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Nop53Q8BK35 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nop53Q8BK35 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Nop53Q8BK35 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nop53Q8BK35 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nop53Q8BK35 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nop53Q8BK35 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.1■□□□□ 0.65
Nop53Q8BK35 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nop53Q8BK35 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nop53Q8BK35 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.1■□□□□ 0.65
Nop53Q8BK35 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms