Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc40Q8BI79 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc40Q8BI79 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.6■□□□□ 0.57
Ccdc40Q8BI79 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc40Q8BI79 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc40Q8BI79 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc40Q8BI79 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc40Q8BI79 Gm27405-201ENSMUST00000184201 112 ntBASIC18.6■□□□□ 0.57
Ccdc40Q8BI79 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.6■□□□□ 0.57
Ccdc40Q8BI79 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc40Q8BI79 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc40Q8BI79 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc40Q8BI79 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc40Q8BI79 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc40Q8BI79 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc40Q8BI79 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc40Q8BI79 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc40Q8BI79 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc40Q8BI79 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc40Q8BI79 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc40Q8BI79 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc40Q8BI79 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.59■□□□□ 0.57
Ccdc40Q8BI79 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc40Q8BI79 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.59■□□□□ 0.57
Ccdc40Q8BI79 Gm6365-201ENSMUST00000054711 744 ntBASIC18.59■□□□□ 0.57
Ccdc40Q8BI79 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc40Q8BI79 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc40Q8BI79 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.59■□□□□ 0.57
Ccdc40Q8BI79 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc40Q8BI79 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc40Q8BI79 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc40Q8BI79 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.59■□□□□ 0.57
Ccdc40Q8BI79 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc40Q8BI79 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc40Q8BI79 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc40Q8BI79 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc40Q8BI79 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.58■□□□□ 0.56
Ccdc40Q8BI79 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.58■□□□□ 0.56
Ccdc40Q8BI79 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Ccdc40Q8BI79 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.58■□□□□ 0.56
Ccdc40Q8BI79 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc40Q8BI79 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc40Q8BI79 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc40Q8BI79 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc40Q8BI79 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc40Q8BI79 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc40Q8BI79 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc40Q8BI79 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc40Q8BI79 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc40Q8BI79 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc40Q8BI79 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc40Q8BI79 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.57■□□□□ 0.56
Ccdc40Q8BI79 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc40Q8BI79 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.57■□□□□ 0.56
Ccdc40Q8BI79 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.57■□□□□ 0.56
Ccdc40Q8BI79 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc40Q8BI79 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc40Q8BI79 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ccdc40Q8BI79 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc40Q8BI79 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Ccdc40Q8BI79 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.57■□□□□ 0.56
Ccdc40Q8BI79 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc40Q8BI79 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc40Q8BI79 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc40Q8BI79 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc40Q8BI79 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc40Q8BI79 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc40Q8BI79 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.56■□□□□ 0.56
Ccdc40Q8BI79 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc40Q8BI79 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ccdc40Q8BI79 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc40Q8BI79 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc40Q8BI79 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc40Q8BI79 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc40Q8BI79 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.56■□□□□ 0.56
Ccdc40Q8BI79 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.56■□□□□ 0.56
Ccdc40Q8BI79 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc40Q8BI79 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.56■□□□□ 0.56
Ccdc40Q8BI79 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc40Q8BI79 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc40Q8BI79 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc40Q8BI79 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc40Q8BI79 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.56■□□□□ 0.56
Ccdc40Q8BI79 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc40Q8BI79 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc40Q8BI79 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc40Q8BI79 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc40Q8BI79 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Ccdc40Q8BI79 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc40Q8BI79 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.55■□□□□ 0.56
Ccdc40Q8BI79 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc40Q8BI79 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc40Q8BI79 Gm6211-202ENSMUST00000167849 925 ntBASIC18.55■□□□□ 0.56
Ccdc40Q8BI79 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms