Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf38Q8BI21 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.24■□□□□ 0.35
Rnf38Q8BI21 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rnf38Q8BI21 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.23■□□□□ 0.35
Rnf38Q8BI21 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf38Q8BI21 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf38Q8BI21 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rnf38Q8BI21 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf38Q8BI21 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf38Q8BI21 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf38Q8BI21 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf38Q8BI21 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rnf38Q8BI21 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf38Q8BI21 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf38Q8BI21 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rnf38Q8BI21 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf38Q8BI21 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf38Q8BI21 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rnf38Q8BI21 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf38Q8BI21 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf38Q8BI21 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf38Q8BI21 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf38Q8BI21 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf38Q8BI21 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf38Q8BI21 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf38Q8BI21 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf38Q8BI21 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf38Q8BI21 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf38Q8BI21 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf38Q8BI21 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rnf38Q8BI21 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.22■□□□□ 0.35
Rnf38Q8BI21 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf38Q8BI21 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf38Q8BI21 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rnf38Q8BI21 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rnf38Q8BI21 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.22■□□□□ 0.35
Rnf38Q8BI21 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf38Q8BI21 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rnf38Q8BI21 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf38Q8BI21 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf38Q8BI21 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf38Q8BI21 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf38Q8BI21 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf38Q8BI21 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf38Q8BI21 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf38Q8BI21 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.21■□□□□ 0.35
Rnf38Q8BI21 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.21■□□□□ 0.35
Rnf38Q8BI21 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rnf38Q8BI21 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf38Q8BI21 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf38Q8BI21 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf38Q8BI21 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rnf38Q8BI21 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
Rnf38Q8BI21 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rnf38Q8BI21 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rnf38Q8BI21 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf38Q8BI21 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rnf38Q8BI21 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf38Q8BI21 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf38Q8BI21 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf38Q8BI21 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf38Q8BI21 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf38Q8BI21 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.2■□□□□ 0.34
Rnf38Q8BI21 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf38Q8BI21 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf38Q8BI21 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf38Q8BI21 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf38Q8BI21 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf38Q8BI21 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf38Q8BI21 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf38Q8BI21 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf38Q8BI21 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf38Q8BI21 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rnf38Q8BI21 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf38Q8BI21 Gm26571-201ENSMUST00000181399 666 ntBASIC17.19■□□□□ 0.34
Rnf38Q8BI21 AV356131-201ENSMUST00000206201 750 ntBASIC17.19■□□□□ 0.34
Rnf38Q8BI21 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.19■□□□□ 0.34
Rnf38Q8BI21 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf38Q8BI21 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf38Q8BI21 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf38Q8BI21 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf38Q8BI21 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf38Q8BI21 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.19■□□□□ 0.34
Rnf38Q8BI21 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.19■□□□□ 0.34
Rnf38Q8BI21 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf38Q8BI21 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf38Q8BI21 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rnf38Q8BI21 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf38Q8BI21 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.19■□□□□ 0.34
Rnf38Q8BI21 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf38Q8BI21 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rnf38Q8BI21 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf38Q8BI21 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf38Q8BI21 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rnf38Q8BI21 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.18■□□□□ 0.34
Rnf38Q8BI21 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Rnf38Q8BI21 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.18■□□□□ 0.34
Rnf38Q8BI21 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf38Q8BI21 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf38Q8BI21 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms