Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3bQ8BHK2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.66■□□□□ 0.26
Scn3bQ8BHK2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Scn3bQ8BHK2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3bQ8BHK2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3bQ8BHK2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3bQ8BHK2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3bQ8BHK2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3bQ8BHK2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3bQ8BHK2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.66■□□□□ 0.26
Scn3bQ8BHK2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.66■□□□□ 0.26
Scn3bQ8BHK2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3bQ8BHK2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3bQ8BHK2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3bQ8BHK2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3bQ8BHK2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Scn3bQ8BHK2 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.66■□□□□ 0.26
Scn3bQ8BHK2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3bQ8BHK2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Scn3bQ8BHK2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.66■□□□□ 0.26
Scn3bQ8BHK2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3bQ8BHK2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3bQ8BHK2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Scn3bQ8BHK2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3bQ8BHK2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3bQ8BHK2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3bQ8BHK2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3bQ8BHK2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.65■□□□□ 0.26
Scn3bQ8BHK2 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.65■□□□□ 0.26
Scn3bQ8BHK2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3bQ8BHK2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3bQ8BHK2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Scn3bQ8BHK2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.65■□□□□ 0.26
Scn3bQ8BHK2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3bQ8BHK2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.65■□□□□ 0.26
Scn3bQ8BHK2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3bQ8BHK2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3bQ8BHK2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3bQ8BHK2 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.65■□□□□ 0.26
Scn3bQ8BHK2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3bQ8BHK2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3bQ8BHK2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3bQ8BHK2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3bQ8BHK2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3bQ8BHK2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3bQ8BHK2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3bQ8BHK2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Scn3bQ8BHK2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3bQ8BHK2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3bQ8BHK2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3bQ8BHK2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3bQ8BHK2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3bQ8BHK2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3bQ8BHK2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.64■□□□□ 0.25
Scn3bQ8BHK2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3bQ8BHK2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn3bQ8BHK2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn3bQ8BHK2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn3bQ8BHK2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn3bQ8BHK2 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.63■□□□□ 0.25
Scn3bQ8BHK2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn3bQ8BHK2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn3bQ8BHK2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Scn3bQ8BHK2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn3bQ8BHK2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn3bQ8BHK2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn3bQ8BHK2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn3bQ8BHK2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn3bQ8BHK2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn3bQ8BHK2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn3bQ8BHK2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn3bQ8BHK2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Scn3bQ8BHK2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn3bQ8BHK2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn3bQ8BHK2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn3bQ8BHK2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
Scn3bQ8BHK2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn3bQ8BHK2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Scn3bQ8BHK2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn3bQ8BHK2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.62■□□□□ 0.25
Scn3bQ8BHK2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn3bQ8BHK2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn3bQ8BHK2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn3bQ8BHK2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn3bQ8BHK2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn3bQ8BHK2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn3bQ8BHK2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn3bQ8BHK2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn3bQ8BHK2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn3bQ8BHK2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn3bQ8BHK2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn3bQ8BHK2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn3bQ8BHK2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn3bQ8BHK2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Scn3bQ8BHK2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn3bQ8BHK2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn3bQ8BHK2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Scn3bQ8BHK2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn3bQ8BHK2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn3bQ8BHK2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms