Protein–RNA interactions for Protein: Q8BGN5

Nipal3, NIPA-like protein 3, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipal3Q8BGN5 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nipal3Q8BGN5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nipal3Q8BGN5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nipal3Q8BGN5 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nipal3Q8BGN5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nipal3Q8BGN5 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.86■□□□□ 0.29
Nipal3Q8BGN5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nipal3Q8BGN5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Nipal3Q8BGN5 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nipal3Q8BGN5 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nipal3Q8BGN5 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nipal3Q8BGN5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nipal3Q8BGN5 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Nipal3Q8BGN5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nipal3Q8BGN5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nipal3Q8BGN5 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nipal3Q8BGN5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Nipal3Q8BGN5 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.85■□□□□ 0.29
Nipal3Q8BGN5 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nipal3Q8BGN5 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nipal3Q8BGN5 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nipal3Q8BGN5 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nipal3Q8BGN5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nipal3Q8BGN5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Nipal3Q8BGN5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.85■□□□□ 0.29
Nipal3Q8BGN5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nipal3Q8BGN5 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nipal3Q8BGN5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Nipal3Q8BGN5 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nipal3Q8BGN5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nipal3Q8BGN5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nipal3Q8BGN5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nipal3Q8BGN5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nipal3Q8BGN5 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.84■□□□□ 0.29
Nipal3Q8BGN5 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Nipal3Q8BGN5 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.84■□□□□ 0.29
Nipal3Q8BGN5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nipal3Q8BGN5 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.84■□□□□ 0.29
Nipal3Q8BGN5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.84■□□□□ 0.29
Nipal3Q8BGN5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nipal3Q8BGN5 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nipal3Q8BGN5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nipal3Q8BGN5 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Nipal3Q8BGN5 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nipal3Q8BGN5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nipal3Q8BGN5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nipal3Q8BGN5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nipal3Q8BGN5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nipal3Q8BGN5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nipal3Q8BGN5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nipal3Q8BGN5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nipal3Q8BGN5 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.83■□□□□ 0.28
Nipal3Q8BGN5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nipal3Q8BGN5 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.83■□□□□ 0.28
Nipal3Q8BGN5 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.83■□□□□ 0.28
Nipal3Q8BGN5 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.83■□□□□ 0.28
Nipal3Q8BGN5 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nipal3Q8BGN5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nipal3Q8BGN5 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nipal3Q8BGN5 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nipal3Q8BGN5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nipal3Q8BGN5 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.83■□□□□ 0.28
Nipal3Q8BGN5 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Nipal3Q8BGN5 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Nipal3Q8BGN5 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Nipal3Q8BGN5 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nipal3Q8BGN5 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nipal3Q8BGN5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nipal3Q8BGN5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nipal3Q8BGN5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nipal3Q8BGN5 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nipal3Q8BGN5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nipal3Q8BGN5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nipal3Q8BGN5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nipal3Q8BGN5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nipal3Q8BGN5 Gm22325-201ENSMUST00000158904 308 ntBASIC16.81■□□□□ 0.28
Nipal3Q8BGN5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms