Protein–RNA interactions for Protein: Q8BG54

Sptlc3, Serine palmitoyltransferase 3, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc3Q8BG54 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sptlc3Q8BG54 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Sptlc3Q8BG54 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sptlc3Q8BG54 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Sptlc3Q8BG54 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Sptlc3Q8BG54 Gm30025-201ENSMUST00000218555 728 ntBASIC21.41■■□□□ 1.02
Sptlc3Q8BG54 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sptlc3Q8BG54 Gm9987-201ENSMUST00000069768 567 ntBASIC21.41■■□□□ 1.02
Sptlc3Q8BG54 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sptlc3Q8BG54 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sptlc3Q8BG54 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sptlc3Q8BG54 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sptlc3Q8BG54 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.4■■□□□ 1.02
Sptlc3Q8BG54 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sptlc3Q8BG54 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sptlc3Q8BG54 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Sptlc3Q8BG54 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sptlc3Q8BG54 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
Sptlc3Q8BG54 Gm13401-201ENSMUST00000117074 291 ntBASIC21.4■■□□□ 1.02
Sptlc3Q8BG54 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Sptlc3Q8BG54 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Sptlc3Q8BG54 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Sptlc3Q8BG54 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC21.4■■□□□ 1.02
Sptlc3Q8BG54 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sptlc3Q8BG54 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sptlc3Q8BG54 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Sptlc3Q8BG54 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sptlc3Q8BG54 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sptlc3Q8BG54 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sptlc3Q8BG54 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sptlc3Q8BG54 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sptlc3Q8BG54 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sptlc3Q8BG54 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Sptlc3Q8BG54 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Sptlc3Q8BG54 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sptlc3Q8BG54 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sptlc3Q8BG54 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sptlc3Q8BG54 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sptlc3Q8BG54 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sptlc3Q8BG54 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Sptlc3Q8BG54 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.39■■□□□ 1.01
Sptlc3Q8BG54 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sptlc3Q8BG54 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sptlc3Q8BG54 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.38■■□□□ 1.01
Sptlc3Q8BG54 Gm12085-201ENSMUST00000119263 940 ntBASIC21.38■■□□□ 1.01
Sptlc3Q8BG54 Gm11539-201ENSMUST00000119837 557 ntBASIC21.38■■□□□ 1.01
Sptlc3Q8BG54 Gm13436-201ENSMUST00000120418 567 ntBASIC21.38■■□□□ 1.01
Sptlc3Q8BG54 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sptlc3Q8BG54 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sptlc3Q8BG54 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sptlc3Q8BG54 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sptlc3Q8BG54 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sptlc3Q8BG54 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sptlc3Q8BG54 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sptlc3Q8BG54 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sptlc3Q8BG54 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sptlc3Q8BG54 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sptlc3Q8BG54 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sptlc3Q8BG54 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sptlc3Q8BG54 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Sptlc3Q8BG54 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Sptlc3Q8BG54 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.37■■□□□ 1.01
Sptlc3Q8BG54 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sptlc3Q8BG54 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 Gm13559-201ENSMUST00000120476 863 ntBASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Sptlc3Q8BG54 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sptlc3Q8BG54 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sptlc3Q8BG54 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sptlc3Q8BG54 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sptlc3Q8BG54 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sptlc3Q8BG54 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.35■■□□□ 1.01
Sptlc3Q8BG54 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sptlc3Q8BG54 Gm6433-201ENSMUST00000118634 875 ntBASIC21.35■■□□□ 1.01
Sptlc3Q8BG54 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sptlc3Q8BG54 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC21.35■■□□□ 1.01
Sptlc3Q8BG54 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.35■■□□□ 1.01
Sptlc3Q8BG54 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sptlc3Q8BG54 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms