Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Prpf40bQ80W14 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf40bQ80W14 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Prpf40bQ80W14 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.6■□□□□ 0.89
Prpf40bQ80W14 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Prpf40bQ80W14 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.6■□□□□ 0.89
Prpf40bQ80W14 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf40bQ80W14 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf40bQ80W14 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf40bQ80W14 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf40bQ80W14 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf40bQ80W14 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.6■□□□□ 0.89
Prpf40bQ80W14 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Prpf40bQ80W14 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.6■□□□□ 0.89
Prpf40bQ80W14 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf40bQ80W14 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf40bQ80W14 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf40bQ80W14 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf40bQ80W14 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf40bQ80W14 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf40bQ80W14 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf40bQ80W14 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf40bQ80W14 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf40bQ80W14 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf40bQ80W14 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf40bQ80W14 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf40bQ80W14 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf40bQ80W14 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf40bQ80W14 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf40bQ80W14 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf40bQ80W14 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf40bQ80W14 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf40bQ80W14 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf40bQ80W14 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Prpf40bQ80W14 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf40bQ80W14 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf40bQ80W14 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Prpf40bQ80W14 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Prpf40bQ80W14 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Prpf40bQ80W14 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.58■□□□□ 0.88
Prpf40bQ80W14 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Prpf40bQ80W14 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Prpf40bQ80W14 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Prpf40bQ80W14 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Prpf40bQ80W14 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Prpf40bQ80W14 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Prpf40bQ80W14 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf40bQ80W14 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf40bQ80W14 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf40bQ80W14 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf40bQ80W14 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf40bQ80W14 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf40bQ80W14 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.57■□□□□ 0.88
Prpf40bQ80W14 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf40bQ80W14 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf40bQ80W14 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf40bQ80W14 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf40bQ80W14 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Prpf40bQ80W14 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.56■□□□□ 0.88
Prpf40bQ80W14 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf40bQ80W14 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Prpf40bQ80W14 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf40bQ80W14 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf40bQ80W14 Gm23634-201ENSMUST00000175071 91 ntBASIC20.56■□□□□ 0.88
Prpf40bQ80W14 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf40bQ80W14 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf40bQ80W14 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.56■□□□□ 0.88
Prpf40bQ80W14 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf40bQ80W14 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf40bQ80W14 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Prpf40bQ80W14 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf40bQ80W14 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.56■□□□□ 0.88
Prpf40bQ80W14 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Prpf40bQ80W14 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf40bQ80W14 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf40bQ80W14 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf40bQ80W14 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf40bQ80W14 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Prpf40bQ80W14 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf40bQ80W14 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.55■□□□□ 0.88
Prpf40bQ80W14 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf40bQ80W14 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.55■□□□□ 0.88
Prpf40bQ80W14 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Prpf40bQ80W14 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf40bQ80W14 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Prpf40bQ80W14 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf40bQ80W14 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf40bQ80W14 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf40bQ80W14 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf40bQ80W14 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf40bQ80W14 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Prpf40bQ80W14 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.54■□□□□ 0.88
Prpf40bQ80W14 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf40bQ80W14 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf40bQ80W14 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf40bQ80W14 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
Prpf40bQ80W14 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.54■□□□□ 0.88
Prpf40bQ80W14 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf40bQ80W14 Mtag2-201ENSMUST00000058665 714 ntBASIC20.54■□□□□ 0.88
Prpf40bQ80W14 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms