Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim62Q80V85 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.53■□□□□ 0.56
Trim62Q80V85 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim62Q80V85 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trim62Q80V85 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trim62Q80V85 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim62Q80V85 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trim62Q80V85 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim62Q80V85 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Trim62Q80V85 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim62Q80V85 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim62Q80V85 Gm11643-201ENSMUST00000119578 864 ntBASIC18.52■□□□□ 0.56
Trim62Q80V85 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim62Q80V85 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim62Q80V85 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim62Q80V85 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Trim62Q80V85 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Trim62Q80V85 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim62Q80V85 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim62Q80V85 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.51■□□□□ 0.55
Trim62Q80V85 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim62Q80V85 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim62Q80V85 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim62Q80V85 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim62Q80V85 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim62Q80V85 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim62Q80V85 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.51■□□□□ 0.55
Trim62Q80V85 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim62Q80V85 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim62Q80V85 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim62Q80V85 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trim62Q80V85 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim62Q80V85 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim62Q80V85 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim62Q80V85 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim62Q80V85 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trim62Q80V85 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim62Q80V85 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim62Q80V85 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim62Q80V85 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.5■□□□□ 0.55
Trim62Q80V85 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim62Q80V85 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim62Q80V85 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim62Q80V85 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trim62Q80V85 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim62Q80V85 Gm18025-201ENSMUST00000221733 862 ntBASIC18.5■□□□□ 0.55
Trim62Q80V85 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim62Q80V85 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim62Q80V85 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim62Q80V85 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim62Q80V85 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim62Q80V85 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim62Q80V85 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim62Q80V85 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim62Q80V85 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.49■□□□□ 0.55
Trim62Q80V85 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim62Q80V85 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Trim62Q80V85 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim62Q80V85 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Trim62Q80V85 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Trim62Q80V85 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim62Q80V85 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim62Q80V85 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim62Q80V85 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim62Q80V85 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trim62Q80V85 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim62Q80V85 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim62Q80V85 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trim62Q80V85 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Trim62Q80V85 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.48■□□□□ 0.55
Trim62Q80V85 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim62Q80V85 Gm10812-201ENSMUST00000099864 546 ntBASIC18.48■□□□□ 0.55
Trim62Q80V85 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.48■□□□□ 0.55
Trim62Q80V85 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trim62Q80V85 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trim62Q80V85 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trim62Q80V85 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim62Q80V85 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim62Q80V85 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim62Q80V85 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim62Q80V85 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim62Q80V85 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim62Q80V85 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Trim62Q80V85 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.47■□□□□ 0.55
Trim62Q80V85 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.47■□□□□ 0.55
Trim62Q80V85 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.47■□□□□ 0.55
Trim62Q80V85 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim62Q80V85 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim62Q80V85 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim62Q80V85 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim62Q80V85 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim62Q80V85 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim62Q80V85 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim62Q80V85 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim62Q80V85 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim62Q80V85 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.46■□□□□ 0.55
Trim62Q80V85 Gm29791-202ENSMUST00000207888 369 ntBASIC18.46■□□□□ 0.55
Trim62Q80V85 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim62Q80V85 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim62Q80V85 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms