Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctdp1Q7TSG2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctdp1Q7TSG2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctdp1Q7TSG2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctdp1Q7TSG2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctdp1Q7TSG2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.5■□□□□ 0.71
Ctdp1Q7TSG2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctdp1Q7TSG2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctdp1Q7TSG2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ctdp1Q7TSG2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ctdp1Q7TSG2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctdp1Q7TSG2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctdp1Q7TSG2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ctdp1Q7TSG2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctdp1Q7TSG2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctdp1Q7TSG2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctdp1Q7TSG2 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.5■□□□□ 0.71
Ctdp1Q7TSG2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ctdp1Q7TSG2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ctdp1Q7TSG2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ctdp1Q7TSG2 Gm10033-202ENSMUST00000211874 928 ntBASIC19.49■□□□□ 0.71
Ctdp1Q7TSG2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Ctdp1Q7TSG2 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.49■□□□□ 0.71
Ctdp1Q7TSG2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Ctdp1Q7TSG2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ctdp1Q7TSG2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ctdp1Q7TSG2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ctdp1Q7TSG2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ctdp1Q7TSG2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ctdp1Q7TSG2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.48■□□□□ 0.71
Ctdp1Q7TSG2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctdp1Q7TSG2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctdp1Q7TSG2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctdp1Q7TSG2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctdp1Q7TSG2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.47■□□□□ 0.71
Ctdp1Q7TSG2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Ctdp1Q7TSG2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ctdp1Q7TSG2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctdp1Q7TSG2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctdp1Q7TSG2 Gm42569-201ENSMUST00000200539 472 ntBASIC19.47■□□□□ 0.71
Ctdp1Q7TSG2 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.47■□□□□ 0.71
Ctdp1Q7TSG2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctdp1Q7TSG2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctdp1Q7TSG2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.47■□□□□ 0.71
Ctdp1Q7TSG2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctdp1Q7TSG2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdp1Q7TSG2 Gm13234-201ENSMUST00000120010 747 ntBASIC19.46■□□□□ 0.71
Ctdp1Q7TSG2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdp1Q7TSG2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdp1Q7TSG2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdp1Q7TSG2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdp1Q7TSG2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdp1Q7TSG2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdp1Q7TSG2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctdp1Q7TSG2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdp1Q7TSG2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdp1Q7TSG2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdp1Q7TSG2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdp1Q7TSG2 Tgds-204ENSMUST00000228543 1594 ntBASIC19.45■□□□□ 0.7
Ctdp1Q7TSG2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdp1Q7TSG2 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.45■□□□□ 0.7
Ctdp1Q7TSG2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Ctdp1Q7TSG2 AV356131-201ENSMUST00000206201 750 ntBASIC19.45■□□□□ 0.7
Ctdp1Q7TSG2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdp1Q7TSG2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdp1Q7TSG2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdp1Q7TSG2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdp1Q7TSG2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Ctdp1Q7TSG2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdp1Q7TSG2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdp1Q7TSG2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ctdp1Q7TSG2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctdp1Q7TSG2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdp1Q7TSG2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdp1Q7TSG2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdp1Q7TSG2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms