Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Exosc3Q7TQK4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Exosc3Q7TQK4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Exosc3Q7TQK4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.44■□□□□ 0.22
Exosc3Q7TQK4 Mir2861-201ENSMUST00000175539 82 ntBASIC16.44■□□□□ 0.22
Exosc3Q7TQK4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.44■□□□□ 0.22
Exosc3Q7TQK4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Exosc3Q7TQK4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Exosc3Q7TQK4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Exosc3Q7TQK4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Exosc3Q7TQK4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Exosc3Q7TQK4 Mir6349-201ENSMUST00000184059 97 ntBASIC16.43■□□□□ 0.22
Exosc3Q7TQK4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Exosc3Q7TQK4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Exosc3Q7TQK4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.43■□□□□ 0.22
Exosc3Q7TQK4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Exosc3Q7TQK4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Exosc3Q7TQK4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Exosc3Q7TQK4 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.43■□□□□ 0.22
Exosc3Q7TQK4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.42■□□□□ 0.22
Exosc3Q7TQK4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Exosc3Q7TQK4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Exosc3Q7TQK4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Exosc3Q7TQK4 Gm15375-201ENSMUST00000119510 849 ntBASIC16.42■□□□□ 0.22
Exosc3Q7TQK4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Exosc3Q7TQK4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Exosc3Q7TQK4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.42■□□□□ 0.22
Exosc3Q7TQK4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Exosc3Q7TQK4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Exosc3Q7TQK4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Exosc3Q7TQK4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Exosc3Q7TQK4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Exosc3Q7TQK4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Exosc3Q7TQK4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Exosc3Q7TQK4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Exosc3Q7TQK4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Exosc3Q7TQK4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Exosc3Q7TQK4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Exosc3Q7TQK4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Exosc3Q7TQK4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Exosc3Q7TQK4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Exosc3Q7TQK4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Exosc3Q7TQK4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Exosc3Q7TQK4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Exosc3Q7TQK4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Exosc3Q7TQK4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Exosc3Q7TQK4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Exosc3Q7TQK4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Exosc3Q7TQK4 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.41■□□□□ 0.22
Exosc3Q7TQK4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Exosc3Q7TQK4 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.41■□□□□ 0.22
Exosc3Q7TQK4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Exosc3Q7TQK4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Exosc3Q7TQK4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Exosc3Q7TQK4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Exosc3Q7TQK4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Exosc3Q7TQK4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Exosc3Q7TQK4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Exosc3Q7TQK4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Exosc3Q7TQK4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Exosc3Q7TQK4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Exosc3Q7TQK4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Exosc3Q7TQK4 Gm27011-201ENSMUST00000182352 972 ntBASIC16.4■□□□□ 0.22
Exosc3Q7TQK4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Exosc3Q7TQK4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Exosc3Q7TQK4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Exosc3Q7TQK4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Exosc3Q7TQK4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Exosc3Q7TQK4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Exosc3Q7TQK4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Exosc3Q7TQK4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Exosc3Q7TQK4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Gm5643-201ENSMUST00000117081 966 ntBASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.39■□□□□ 0.21
Exosc3Q7TQK4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Exosc3Q7TQK4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Exosc3Q7TQK4 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms