Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf139Q7TMV1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Rnf139Q7TMV1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Rnf139Q7TMV1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rnf139Q7TMV1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Rnf139Q7TMV1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Rnf139Q7TMV1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf139Q7TMV1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf139Q7TMV1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf139Q7TMV1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf139Q7TMV1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.12■□□□□ 0.65
Rnf139Q7TMV1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf139Q7TMV1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf139Q7TMV1 Gm15375-201ENSMUST00000119510 849 ntBASIC19.12■□□□□ 0.65
Rnf139Q7TMV1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf139Q7TMV1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Rnf139Q7TMV1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rnf139Q7TMV1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf139Q7TMV1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf139Q7TMV1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
Rnf139Q7TMV1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf139Q7TMV1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rnf139Q7TMV1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.12■□□□□ 0.65
Rnf139Q7TMV1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf139Q7TMV1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf139Q7TMV1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf139Q7TMV1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf139Q7TMV1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Rnf139Q7TMV1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf139Q7TMV1 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.11■□□□□ 0.65
Rnf139Q7TMV1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.11■□□□□ 0.65
Rnf139Q7TMV1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf139Q7TMV1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf139Q7TMV1 Gm18666-201ENSMUST00000190039 958 ntBASIC19.11■□□□□ 0.65
Rnf139Q7TMV1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
Rnf139Q7TMV1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf139Q7TMV1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf139Q7TMV1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf139Q7TMV1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf139Q7TMV1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rnf139Q7TMV1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf139Q7TMV1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Rnf139Q7TMV1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 Mir6349-201ENSMUST00000184059 97 ntBASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Rnf139Q7TMV1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf139Q7TMV1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.09■□□□□ 0.65
Rnf139Q7TMV1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rnf139Q7TMV1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf139Q7TMV1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rnf139Q7TMV1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Rnf139Q7TMV1 Gm5643-201ENSMUST00000117081 966 ntBASIC19.09■□□□□ 0.65
Rnf139Q7TMV1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf139Q7TMV1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf139Q7TMV1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Rnf139Q7TMV1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf139Q7TMV1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf139Q7TMV1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Rnf139Q7TMV1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf139Q7TMV1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf139Q7TMV1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Rnf139Q7TMV1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf139Q7TMV1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rnf139Q7TMV1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rnf139Q7TMV1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Rnf139Q7TMV1 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.08■□□□□ 0.65
Rnf139Q7TMV1 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.08■□□□□ 0.64
Rnf139Q7TMV1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf139Q7TMV1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf139Q7TMV1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf139Q7TMV1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.08■□□□□ 0.64
Rnf139Q7TMV1 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.08■□□□□ 0.64
Rnf139Q7TMV1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Rnf139Q7TMV1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf139Q7TMV1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf139Q7TMV1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf139Q7TMV1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf139Q7TMV1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf139Q7TMV1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf139Q7TMV1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms