Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.42■□□□□ 0.38
Scn4bQ7M729 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.42■□□□□ 0.38
Scn4bQ7M729 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Scn4bQ7M729 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn4bQ7M729 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn4bQ7M729 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn4bQ7M729 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn4bQ7M729 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn4bQ7M729 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.42■□□□□ 0.38
Scn4bQ7M729 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn4bQ7M729 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Scn4bQ7M729 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Scn4bQ7M729 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn4bQ7M729 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn4bQ7M729 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn4bQ7M729 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn4bQ7M729 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.41■□□□□ 0.38
Scn4bQ7M729 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Scn4bQ7M729 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.41■□□□□ 0.38
Scn4bQ7M729 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn4bQ7M729 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn4bQ7M729 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Scn4bQ7M729 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scn4bQ7M729 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn4bQ7M729 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn4bQ7M729 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn4bQ7M729 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn4bQ7M729 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn4bQ7M729 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn4bQ7M729 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scn4bQ7M729 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn4bQ7M729 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.4■□□□□ 0.38
Scn4bQ7M729 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn4bQ7M729 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn4bQ7M729 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn4bQ7M729 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scn4bQ7M729 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn4bQ7M729 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn4bQ7M729 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn4bQ7M729 Gm5408-201ENSMUST00000197998 747 ntBASIC17.39■□□□□ 0.37
Scn4bQ7M729 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.39■□□□□ 0.37
Scn4bQ7M729 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Scn4bQ7M729 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.39■□□□□ 0.37
Scn4bQ7M729 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn4bQ7M729 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn4bQ7M729 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scn4bQ7M729 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Scn4bQ7M729 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.39■□□□□ 0.37
Scn4bQ7M729 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scn4bQ7M729 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scn4bQ7M729 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scn4bQ7M729 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scn4bQ7M729 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn4bQ7M729 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn4bQ7M729 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn4bQ7M729 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn4bQ7M729 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scn4bQ7M729 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.38■□□□□ 0.37
Scn4bQ7M729 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Scn4bQ7M729 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Scn4bQ7M729 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn4bQ7M729 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn4bQ7M729 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.38■□□□□ 0.37
Scn4bQ7M729 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn4bQ7M729 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn4bQ7M729 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.38■□□□□ 0.37
Scn4bQ7M729 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn4bQ7M729 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn4bQ7M729 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn4bQ7M729 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn4bQ7M729 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Scn4bQ7M729 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.37■□□□□ 0.37
Scn4bQ7M729 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn4bQ7M729 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn4bQ7M729 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.37■□□□□ 0.37
Scn4bQ7M729 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scn4bQ7M729 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn4bQ7M729 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Scn4bQ7M729 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn4bQ7M729 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn4bQ7M729 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Scn4bQ7M729 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn4bQ7M729 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn4bQ7M729 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn4bQ7M729 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.36■□□□□ 0.37
Scn4bQ7M729 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn4bQ7M729 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn4bQ7M729 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn4bQ7M729 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn4bQ7M729 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scn4bQ7M729 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.36■□□□□ 0.37
Scn4bQ7M729 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn4bQ7M729 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn4bQ7M729 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn4bQ7M729 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn4bQ7M729 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.36■□□□□ 0.37
Scn4bQ7M729 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scn4bQ7M729 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Scn4bQ7M729 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn4bQ7M729 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms