Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cspg5Q71M36 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cspg5Q71M36 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cspg5Q71M36 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.5■□□□□ 0.55
Cspg5Q71M36 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cspg5Q71M36 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cspg5Q71M36 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cspg5Q71M36 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cspg5Q71M36 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cspg5Q71M36 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cspg5Q71M36 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cspg5Q71M36 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cspg5Q71M36 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cspg5Q71M36 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cspg5Q71M36 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.49■□□□□ 0.55
Cspg5Q71M36 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cspg5Q71M36 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cspg5Q71M36 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cspg5Q71M36 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cspg5Q71M36 Flg-201ENSMUST00000050758 1488 ntBASIC18.49■□□□□ 0.55
Cspg5Q71M36 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cspg5Q71M36 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cspg5Q71M36 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cspg5Q71M36 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cspg5Q71M36 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Cspg5Q71M36 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cspg5Q71M36 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.48■□□□□ 0.55
Cspg5Q71M36 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cspg5Q71M36 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cspg5Q71M36 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cspg5Q71M36 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cspg5Q71M36 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cspg5Q71M36 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Cspg5Q71M36 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cspg5Q71M36 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Cspg5Q71M36 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cspg5Q71M36 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cspg5Q71M36 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cspg5Q71M36 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Cspg5Q71M36 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cspg5Q71M36 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cspg5Q71M36 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cspg5Q71M36 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.47■□□□□ 0.55
Cspg5Q71M36 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cspg5Q71M36 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cspg5Q71M36 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cspg5Q71M36 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cspg5Q71M36 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Cspg5Q71M36 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.47■□□□□ 0.55
Cspg5Q71M36 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cspg5Q71M36 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cspg5Q71M36 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cspg5Q71M36 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.46■□□□□ 0.55
Cspg5Q71M36 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.46■□□□□ 0.55
Cspg5Q71M36 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Cspg5Q71M36 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cspg5Q71M36 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.46■□□□□ 0.55
Cspg5Q71M36 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cspg5Q71M36 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.46■□□□□ 0.55
Cspg5Q71M36 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.46■□□□□ 0.55
Cspg5Q71M36 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cspg5Q71M36 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cspg5Q71M36 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cspg5Q71M36 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cspg5Q71M36 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cspg5Q71M36 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
Cspg5Q71M36 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Cspg5Q71M36 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cspg5Q71M36 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cspg5Q71M36 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Cspg5Q71M36 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.45■□□□□ 0.54
Cspg5Q71M36 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cspg5Q71M36 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cspg5Q71M36 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cspg5Q71M36 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cspg5Q71M36 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Cspg5Q71M36 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.45■□□□□ 0.54
Cspg5Q71M36 Gm30025-201ENSMUST00000218555 728 ntBASIC18.45■□□□□ 0.54
Cspg5Q71M36 Gm7367-201ENSMUST00000057611 492 ntBASIC18.45■□□□□ 0.54
Cspg5Q71M36 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cspg5Q71M36 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cspg5Q71M36 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cspg5Q71M36 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cspg5Q71M36 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cspg5Q71M36 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cspg5Q71M36 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cspg5Q71M36 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Cspg5Q71M36 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cspg5Q71M36 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cspg5Q71M36 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cspg5Q71M36 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.44■□□□□ 0.54
Cspg5Q71M36 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Cspg5Q71M36 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.44■□□□□ 0.54
Cspg5Q71M36 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.44■□□□□ 0.54
Cspg5Q71M36 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cspg5Q71M36 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cspg5Q71M36 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cspg5Q71M36 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.44■□□□□ 0.54
Cspg5Q71M36 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cspg5Q71M36 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms