Protein–RNA interactions for Protein: Q6ZQM0

Rffl, E3 ubiquitin-protein ligase rififylin, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfflQ6ZQM0 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.35■□□□□ 0.37
RfflQ6ZQM0 Gm27801-201ENSMUST00000184174 223 ntBASIC17.35■□□□□ 0.37
RfflQ6ZQM0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.35■□□□□ 0.37
RfflQ6ZQM0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.35■□□□□ 0.37
RfflQ6ZQM0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RfflQ6ZQM0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.35■□□□□ 0.37
RfflQ6ZQM0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RfflQ6ZQM0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RfflQ6ZQM0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RfflQ6ZQM0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.35■□□□□ 0.37
RfflQ6ZQM0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RfflQ6ZQM0 Gm12251-201ENSMUST00000117893 792 ntBASIC17.34■□□□□ 0.37
RfflQ6ZQM0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RfflQ6ZQM0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RfflQ6ZQM0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RfflQ6ZQM0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RfflQ6ZQM0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RfflQ6ZQM0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RfflQ6ZQM0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RfflQ6ZQM0 Gm5812-201ENSMUST00000061073 957 ntBASIC17.34■□□□□ 0.37
RfflQ6ZQM0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RfflQ6ZQM0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RfflQ6ZQM0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RfflQ6ZQM0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RfflQ6ZQM0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RfflQ6ZQM0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RfflQ6ZQM0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RfflQ6ZQM0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RfflQ6ZQM0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RfflQ6ZQM0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RfflQ6ZQM0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RfflQ6ZQM0 Idnk-204ENSMUST00000226010 1898 ntBASIC17.33■□□□□ 0.36
RfflQ6ZQM0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RfflQ6ZQM0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RfflQ6ZQM0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RfflQ6ZQM0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RfflQ6ZQM0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RfflQ6ZQM0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.32■□□□□ 0.36
RfflQ6ZQM0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.32■□□□□ 0.36
RfflQ6ZQM0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RfflQ6ZQM0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RfflQ6ZQM0 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.32■□□□□ 0.36
RfflQ6ZQM0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RfflQ6ZQM0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RfflQ6ZQM0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RfflQ6ZQM0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RfflQ6ZQM0 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.31■□□□□ 0.36
RfflQ6ZQM0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RfflQ6ZQM0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RfflQ6ZQM0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RfflQ6ZQM0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RfflQ6ZQM0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RfflQ6ZQM0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RfflQ6ZQM0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RfflQ6ZQM0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RfflQ6ZQM0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RfflQ6ZQM0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RfflQ6ZQM0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RfflQ6ZQM0 Gm11421-201ENSMUST00000122124 294 ntBASIC17.31■□□□□ 0.36
RfflQ6ZQM0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RfflQ6ZQM0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RfflQ6ZQM0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RfflQ6ZQM0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RfflQ6ZQM0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RfflQ6ZQM0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RfflQ6ZQM0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RfflQ6ZQM0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RfflQ6ZQM0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RfflQ6ZQM0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RfflQ6ZQM0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RfflQ6ZQM0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RfflQ6ZQM0 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.3■□□□□ 0.36
RfflQ6ZQM0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RfflQ6ZQM0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RfflQ6ZQM0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RfflQ6ZQM0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RfflQ6ZQM0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RfflQ6ZQM0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RfflQ6ZQM0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RfflQ6ZQM0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RfflQ6ZQM0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RfflQ6ZQM0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RfflQ6ZQM0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RfflQ6ZQM0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RfflQ6ZQM0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RfflQ6ZQM0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RfflQ6ZQM0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RfflQ6ZQM0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RfflQ6ZQM0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RfflQ6ZQM0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RfflQ6ZQM0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.29■□□□□ 0.36
RfflQ6ZQM0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.29■□□□□ 0.36
RfflQ6ZQM0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RfflQ6ZQM0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RfflQ6ZQM0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RfflQ6ZQM0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.29■□□□□ 0.36
RfflQ6ZQM0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RfflQ6ZQM0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.29■□□□□ 0.36
RfflQ6ZQM0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RfflQ6ZQM0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms