Protein–RNA interactions for Protein: Q6Q473

Clca4a, Calcium-activated chloride channel regulator 4A, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca4aQ6Q473 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clca4aQ6Q473 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.32■□□□□ 0.84
Clca4aQ6Q473 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clca4aQ6Q473 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clca4aQ6Q473 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.32■□□□□ 0.84
Clca4aQ6Q473 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Clca4aQ6Q473 Gm21814-202ENSMUST00000203277 873 ntBASIC20.32■□□□□ 0.84
Clca4aQ6Q473 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clca4aQ6Q473 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clca4aQ6Q473 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clca4aQ6Q473 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clca4aQ6Q473 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clca4aQ6Q473 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clca4aQ6Q473 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clca4aQ6Q473 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clca4aQ6Q473 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Clca4aQ6Q473 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.31■□□□□ 0.84
Clca4aQ6Q473 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clca4aQ6Q473 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clca4aQ6Q473 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clca4aQ6Q473 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clca4aQ6Q473 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clca4aQ6Q473 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clca4aQ6Q473 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Clca4aQ6Q473 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clca4aQ6Q473 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clca4aQ6Q473 Gm13401-201ENSMUST00000117074 291 ntBASIC20.3■□□□□ 0.84
Clca4aQ6Q473 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.3■□□□□ 0.84
Clca4aQ6Q473 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clca4aQ6Q473 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clca4aQ6Q473 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clca4aQ6Q473 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clca4aQ6Q473 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clca4aQ6Q473 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clca4aQ6Q473 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clca4aQ6Q473 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Clca4aQ6Q473 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Clca4aQ6Q473 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Clca4aQ6Q473 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clca4aQ6Q473 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clca4aQ6Q473 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Clca4aQ6Q473 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Clca4aQ6Q473 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clca4aQ6Q473 Gm15565-201ENSMUST00000118890 427 ntBASIC20.29■□□□□ 0.84
Clca4aQ6Q473 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.29■□□□□ 0.84
Clca4aQ6Q473 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clca4aQ6Q473 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clca4aQ6Q473 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clca4aQ6Q473 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clca4aQ6Q473 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clca4aQ6Q473 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clca4aQ6Q473 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clca4aQ6Q473 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Clca4aQ6Q473 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clca4aQ6Q473 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clca4aQ6Q473 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clca4aQ6Q473 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clca4aQ6Q473 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.28■□□□□ 0.84
Clca4aQ6Q473 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clca4aQ6Q473 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.28■□□□□ 0.84
Clca4aQ6Q473 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clca4aQ6Q473 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clca4aQ6Q473 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clca4aQ6Q473 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clca4aQ6Q473 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clca4aQ6Q473 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.28■□□□□ 0.84
Clca4aQ6Q473 Gm10517-202ENSMUST00000192970 758 ntBASIC20.28■□□□□ 0.84
Clca4aQ6Q473 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clca4aQ6Q473 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.28■□□□□ 0.84
Clca4aQ6Q473 Gm5417-201ENSMUST00000079706 384 ntBASIC20.28■□□□□ 0.84
Clca4aQ6Q473 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clca4aQ6Q473 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clca4aQ6Q473 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Clca4aQ6Q473 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clca4aQ6Q473 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clca4aQ6Q473 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clca4aQ6Q473 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Clca4aQ6Q473 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clca4aQ6Q473 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clca4aQ6Q473 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clca4aQ6Q473 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clca4aQ6Q473 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clca4aQ6Q473 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clca4aQ6Q473 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clca4aQ6Q473 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Clca4aQ6Q473 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.27■□□□□ 0.84
Clca4aQ6Q473 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.27■□□□□ 0.84
Clca4aQ6Q473 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.27■□□□□ 0.84
Clca4aQ6Q473 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clca4aQ6Q473 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clca4aQ6Q473 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clca4aQ6Q473 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clca4aQ6Q473 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Clca4aQ6Q473 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Clca4aQ6Q473 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.83
Clca4aQ6Q473 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.26■□□□□ 0.83
Clca4aQ6Q473 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clca4aQ6Q473 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Clca4aQ6Q473 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clca4aQ6Q473 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms