Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rif1Q6PR54 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.06■□□□□ 0
Rif1Q6PR54 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.06■□□□□ 0
Rif1Q6PR54 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Rif1Q6PR54 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.06■□□□□ 0
Rif1Q6PR54 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rif1Q6PR54 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rif1Q6PR54 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rif1Q6PR54 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rif1Q6PR54 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rif1Q6PR54 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rif1Q6PR54 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rif1Q6PR54 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.06■□□□□ 0
Rif1Q6PR54 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rif1Q6PR54 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.05■□□□□ 0
Rif1Q6PR54 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.05■□□□□ 0
Rif1Q6PR54 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rif1Q6PR54 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.05■□□□□ 0
Rif1Q6PR54 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ 0
Rif1Q6PR54 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rif1Q6PR54 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Rif1Q6PR54 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rif1Q6PR54 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rif1Q6PR54 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.05■□□□□ -0
Rif1Q6PR54 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rif1Q6PR54 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rif1Q6PR54 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rif1Q6PR54 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rif1Q6PR54 Gm12085-201ENSMUST00000119263 940 ntBASIC15.04■□□□□ -0
Rif1Q6PR54 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.04■□□□□ -0
Rif1Q6PR54 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rif1Q6PR54 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rif1Q6PR54 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rif1Q6PR54 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rif1Q6PR54 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rif1Q6PR54 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rif1Q6PR54 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rif1Q6PR54 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rif1Q6PR54 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.04■□□□□ -0
Rif1Q6PR54 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.04■□□□□ -0
Rif1Q6PR54 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.04■□□□□ -0
Rif1Q6PR54 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rif1Q6PR54 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rif1Q6PR54 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rif1Q6PR54 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.04■□□□□ -0
Rif1Q6PR54 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rif1Q6PR54 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rif1Q6PR54 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rif1Q6PR54 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rif1Q6PR54 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rif1Q6PR54 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rif1Q6PR54 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.03■□□□□ -0
Rif1Q6PR54 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rif1Q6PR54 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rif1Q6PR54 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.03■□□□□ -0
Rif1Q6PR54 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rif1Q6PR54 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rif1Q6PR54 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rif1Q6PR54 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rif1Q6PR54 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rif1Q6PR54 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rif1Q6PR54 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.02■□□□□ -0
Rif1Q6PR54 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rif1Q6PR54 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rif1Q6PR54 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rif1Q6PR54 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.02■□□□□ -0
Rif1Q6PR54 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rif1Q6PR54 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rif1Q6PR54 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rif1Q6PR54 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rif1Q6PR54 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rif1Q6PR54 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rif1Q6PR54 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rif1Q6PR54 Gm15794-201ENSMUST00000120182 631 ntBASIC15.02□□□□□ -0.01
Rif1Q6PR54 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Rif1Q6PR54 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rif1Q6PR54 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rif1Q6PR54 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Rif1Q6PR54 Mir5126-201ENSMUST00000175513 77 ntBASIC15.02□□□□□ -0.01
Rif1Q6PR54 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.02□□□□□ -0.01
Rif1Q6PR54 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rif1Q6PR54 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rif1Q6PR54 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rif1Q6PR54 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rif1Q6PR54 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rif1Q6PR54 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rif1Q6PR54 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Rif1Q6PR54 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Rif1Q6PR54 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rif1Q6PR54 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rif1Q6PR54 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Rif1Q6PR54 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rif1Q6PR54 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rif1Q6PR54 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rif1Q6PR54 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rif1Q6PR54 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rif1Q6PR54 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.01□□□□□ -0.01
Rif1Q6PR54 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Rif1Q6PR54 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rif1Q6PR54 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms