Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ShbQ6PD21 Gm27459-201ENSMUST00000184860 107 ntBASIC19.44■□□□□ 0.7
ShbQ6PD21 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ShbQ6PD21 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ShbQ6PD21 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ShbQ6PD21 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.43■□□□□ 0.7
ShbQ6PD21 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ShbQ6PD21 Gm13884-201ENSMUST00000118103 829 ntBASIC19.43■□□□□ 0.7
ShbQ6PD21 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ShbQ6PD21 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.43■□□□□ 0.7
ShbQ6PD21 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ShbQ6PD21 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ShbQ6PD21 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ShbQ6PD21 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ShbQ6PD21 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ShbQ6PD21 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ShbQ6PD21 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShbQ6PD21 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShbQ6PD21 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShbQ6PD21 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ShbQ6PD21 Gm37722-201ENSMUST00000193757 208 ntBASIC19.42■□□□□ 0.7
ShbQ6PD21 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.42■□□□□ 0.7
ShbQ6PD21 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShbQ6PD21 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShbQ6PD21 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShbQ6PD21 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShbQ6PD21 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShbQ6PD21 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShbQ6PD21 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShbQ6PD21 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.41■□□□□ 0.7
ShbQ6PD21 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.41■□□□□ 0.7
ShbQ6PD21 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShbQ6PD21 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.41■□□□□ 0.7
ShbQ6PD21 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShbQ6PD21 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ShbQ6PD21 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ShbQ6PD21 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShbQ6PD21 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.41■□□□□ 0.7
ShbQ6PD21 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ShbQ6PD21 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ShbQ6PD21 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShbQ6PD21 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShbQ6PD21 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ShbQ6PD21 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ShbQ6PD21 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ShbQ6PD21 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ShbQ6PD21 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.4■□□□□ 0.7
ShbQ6PD21 Mir8098-201ENSMUST00000184011 137 ntBASIC19.4■□□□□ 0.7
ShbQ6PD21 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ShbQ6PD21 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ShbQ6PD21 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ShbQ6PD21 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ShbQ6PD21 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ShbQ6PD21 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ShbQ6PD21 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
ShbQ6PD21 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
ShbQ6PD21 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ShbQ6PD21 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.39■□□□□ 0.69
ShbQ6PD21 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ShbQ6PD21 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ShbQ6PD21 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ShbQ6PD21 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ShbQ6PD21 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.39■□□□□ 0.69
ShbQ6PD21 Gm37025-201ENSMUST00000195159 829 ntBASIC19.39■□□□□ 0.69
ShbQ6PD21 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.39■□□□□ 0.69
ShbQ6PD21 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.39■□□□□ 0.69
ShbQ6PD21 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ShbQ6PD21 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ShbQ6PD21 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.39■□□□□ 0.69
ShbQ6PD21 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.39■□□□□ 0.69
ShbQ6PD21 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ShbQ6PD21 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.39■□□□□ 0.69
ShbQ6PD21 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ShbQ6PD21 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ShbQ6PD21 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ShbQ6PD21 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ShbQ6PD21 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ShbQ6PD21 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ShbQ6PD21 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ShbQ6PD21 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.38■□□□□ 0.69
ShbQ6PD21 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ShbQ6PD21 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ShbQ6PD21 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ShbQ6PD21 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ShbQ6PD21 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ShbQ6PD21 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ShbQ6PD21 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
ShbQ6PD21 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ShbQ6PD21 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ShbQ6PD21 Actl10-202ENSMUST00000226583 1501 ntBASIC19.37■□□□□ 0.69
ShbQ6PD21 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ShbQ6PD21 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ShbQ6PD21 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ShbQ6PD21 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ShbQ6PD21 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.37■□□□□ 0.69
ShbQ6PD21 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.37■□□□□ 0.69
ShbQ6PD21 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ShbQ6PD21 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ShbQ6PD21 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.37■□□□□ 0.69
ShbQ6PD21 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms