Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Herc4Q6PAV2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Herc4Q6PAV2 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.78■□□□□ 0.76
Herc4Q6PAV2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Herc4Q6PAV2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Herc4Q6PAV2 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.77■□□□□ 0.76
Herc4Q6PAV2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Herc4Q6PAV2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Herc4Q6PAV2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Herc4Q6PAV2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Herc4Q6PAV2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Herc4Q6PAV2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.77■□□□□ 0.76
Herc4Q6PAV2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Herc4Q6PAV2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.77■□□□□ 0.76
Herc4Q6PAV2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Herc4Q6PAV2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Herc4Q6PAV2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.77■□□□□ 0.76
Herc4Q6PAV2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Herc4Q6PAV2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.77■□□□□ 0.75
Herc4Q6PAV2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Herc4Q6PAV2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.76■□□□□ 0.75
Herc4Q6PAV2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Herc4Q6PAV2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Herc4Q6PAV2 Gm12896-201ENSMUST00000118430 226 ntBASIC19.76■□□□□ 0.75
Herc4Q6PAV2 Gm11927-201ENSMUST00000118472 759 ntBASIC19.76■□□□□ 0.75
Herc4Q6PAV2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Herc4Q6PAV2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Herc4Q6PAV2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Herc4Q6PAV2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Herc4Q6PAV2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Herc4Q6PAV2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.76■□□□□ 0.75
Herc4Q6PAV2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Herc4Q6PAV2 Rarb-207ENSMUST00000225921 2756 ntBASIC19.76■□□□□ 0.75
Herc4Q6PAV2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Herc4Q6PAV2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Herc4Q6PAV2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Herc4Q6PAV2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Herc4Q6PAV2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Herc4Q6PAV2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Herc4Q6PAV2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Herc4Q6PAV2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Herc4Q6PAV2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.75■□□□□ 0.75
Herc4Q6PAV2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Herc4Q6PAV2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Herc4Q6PAV2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Herc4Q6PAV2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Herc4Q6PAV2 Dio3-201ENSMUST00000097228 1449 ntBASIC19.75■□□□□ 0.75
Herc4Q6PAV2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Herc4Q6PAV2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Herc4Q6PAV2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Herc4Q6PAV2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Herc4Q6PAV2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.74■□□□□ 0.75
Herc4Q6PAV2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Herc4Q6PAV2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Herc4Q6PAV2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Herc4Q6PAV2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Herc4Q6PAV2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Herc4Q6PAV2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Herc4Q6PAV2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Herc4Q6PAV2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Herc4Q6PAV2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Herc4Q6PAV2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.73■□□□□ 0.75
Herc4Q6PAV2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Herc4Q6PAV2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Herc4Q6PAV2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.73■□□□□ 0.75
Herc4Q6PAV2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Herc4Q6PAV2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Herc4Q6PAV2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Herc4Q6PAV2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Herc4Q6PAV2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Herc4Q6PAV2 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.73■□□□□ 0.75
Herc4Q6PAV2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Herc4Q6PAV2 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.73■□□□□ 0.75
Herc4Q6PAV2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Herc4Q6PAV2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Herc4Q6PAV2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Herc4Q6PAV2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Herc4Q6PAV2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Herc4Q6PAV2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Herc4Q6PAV2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Herc4Q6PAV2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Herc4Q6PAV2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Herc4Q6PAV2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.72■□□□□ 0.75
Herc4Q6PAV2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.72■□□□□ 0.75
Herc4Q6PAV2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Herc4Q6PAV2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Herc4Q6PAV2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Herc4Q6PAV2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.72■□□□□ 0.75
Herc4Q6PAV2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Herc4Q6PAV2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Herc4Q6PAV2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Herc4Q6PAV2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Herc4Q6PAV2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.71■□□□□ 0.75
Herc4Q6PAV2 Gm20049-201ENSMUST00000219950 730 ntBASIC19.71■□□□□ 0.75
Herc4Q6PAV2 Mtag2-201ENSMUST00000058665 714 ntBASIC19.71■□□□□ 0.75
Herc4Q6PAV2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Herc4Q6PAV2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Herc4Q6PAV2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Herc4Q6PAV2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Herc4Q6PAV2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms