Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Abcf1Q6P542 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Abcf1Q6P542 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Abcf1Q6P542 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Abcf1Q6P542 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20■□□□□ 0.79
Abcf1Q6P542 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Abcf1Q6P542 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Abcf1Q6P542 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Abcf1Q6P542 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Abcf1Q6P542 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Abcf1Q6P542 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Abcf1Q6P542 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.99■□□□□ 0.79
Abcf1Q6P542 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcf1Q6P542 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcf1Q6P542 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcf1Q6P542 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcf1Q6P542 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Abcf1Q6P542 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Abcf1Q6P542 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcf1Q6P542 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcf1Q6P542 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcf1Q6P542 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcf1Q6P542 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcf1Q6P542 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Abcf1Q6P542 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcf1Q6P542 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcf1Q6P542 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Abcf1Q6P542 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcf1Q6P542 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcf1Q6P542 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcf1Q6P542 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcf1Q6P542 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcf1Q6P542 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcf1Q6P542 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcf1Q6P542 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcf1Q6P542 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abcf1Q6P542 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Abcf1Q6P542 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Abcf1Q6P542 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Abcf1Q6P542 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Abcf1Q6P542 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Abcf1Q6P542 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.97■□□□□ 0.79
Abcf1Q6P542 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Abcf1Q6P542 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Abcf1Q6P542 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Abcf1Q6P542 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.97■□□□□ 0.79
Abcf1Q6P542 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Abcf1Q6P542 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Abcf1Q6P542 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Abcf1Q6P542 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Abcf1Q6P542 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.97■□□□□ 0.79
Abcf1Q6P542 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Abcf1Q6P542 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.97■□□□□ 0.79
Abcf1Q6P542 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Abcf1Q6P542 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Abcf1Q6P542 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Abcf1Q6P542 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Abcf1Q6P542 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Abcf1Q6P542 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Abcf1Q6P542 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Abcf1Q6P542 Gm13534-201ENSMUST00000121169 513 ntBASIC19.96■□□□□ 0.79
Abcf1Q6P542 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.96■□□□□ 0.79
Abcf1Q6P542 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Abcf1Q6P542 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Abcf1Q6P542 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Abcf1Q6P542 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Abcf1Q6P542 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Abcf1Q6P542 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Abcf1Q6P542 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Abcf1Q6P542 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Abcf1Q6P542 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Abcf1Q6P542 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Abcf1Q6P542 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Abcf1Q6P542 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Abcf1Q6P542 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Abcf1Q6P542 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Abcf1Q6P542 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Abcf1Q6P542 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms