Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtl3Q6P1Y1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
Rtl3Q6P1Y1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtl3Q6P1Y1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtl3Q6P1Y1 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.47■□□□□ 0.55
Rtl3Q6P1Y1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtl3Q6P1Y1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtl3Q6P1Y1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Rtl3Q6P1Y1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rtl3Q6P1Y1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.47■□□□□ 0.55
Rtl3Q6P1Y1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtl3Q6P1Y1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.47■□□□□ 0.55
Rtl3Q6P1Y1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtl3Q6P1Y1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rtl3Q6P1Y1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtl3Q6P1Y1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rtl3Q6P1Y1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtl3Q6P1Y1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Rtl3Q6P1Y1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Rtl3Q6P1Y1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.46■□□□□ 0.55
Rtl3Q6P1Y1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtl3Q6P1Y1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtl3Q6P1Y1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtl3Q6P1Y1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtl3Q6P1Y1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.46■□□□□ 0.55
Rtl3Q6P1Y1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtl3Q6P1Y1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.46■□□□□ 0.55
Rtl3Q6P1Y1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.46■□□□□ 0.55
Rtl3Q6P1Y1 Gm7977-201ENSMUST00000193787 748 ntBASIC18.46■□□□□ 0.55
Rtl3Q6P1Y1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtl3Q6P1Y1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtl3Q6P1Y1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtl3Q6P1Y1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtl3Q6P1Y1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtl3Q6P1Y1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Rtl3Q6P1Y1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rtl3Q6P1Y1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Rtl3Q6P1Y1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtl3Q6P1Y1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtl3Q6P1Y1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtl3Q6P1Y1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtl3Q6P1Y1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Rtl3Q6P1Y1 Gm6576-201ENSMUST00000169678 883 ntBASIC18.45■□□□□ 0.54
Rtl3Q6P1Y1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.45■□□□□ 0.54
Rtl3Q6P1Y1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Rtl3Q6P1Y1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtl3Q6P1Y1 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.45■□□□□ 0.54
Rtl3Q6P1Y1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtl3Q6P1Y1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtl3Q6P1Y1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtl3Q6P1Y1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rtl3Q6P1Y1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtl3Q6P1Y1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rtl3Q6P1Y1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtl3Q6P1Y1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtl3Q6P1Y1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtl3Q6P1Y1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.44■□□□□ 0.54
Rtl3Q6P1Y1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtl3Q6P1Y1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rtl3Q6P1Y1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtl3Q6P1Y1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtl3Q6P1Y1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rtl3Q6P1Y1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtl3Q6P1Y1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtl3Q6P1Y1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.44■□□□□ 0.54
Rtl3Q6P1Y1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Rtl3Q6P1Y1 Fst-202ENSMUST00000223640 2612 ntBASIC18.43■□□□□ 0.54
Rtl3Q6P1Y1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtl3Q6P1Y1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtl3Q6P1Y1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtl3Q6P1Y1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.43■□□□□ 0.54
Rtl3Q6P1Y1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtl3Q6P1Y1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.43■□□□□ 0.54
Rtl3Q6P1Y1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rtl3Q6P1Y1 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.43■□□□□ 0.54
Rtl3Q6P1Y1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtl3Q6P1Y1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtl3Q6P1Y1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtl3Q6P1Y1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rtl3Q6P1Y1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Rtl3Q6P1Y1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rtl3Q6P1Y1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rtl3Q6P1Y1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rtl3Q6P1Y1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rtl3Q6P1Y1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rtl3Q6P1Y1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.42■□□□□ 0.54
Rtl3Q6P1Y1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.42■□□□□ 0.54
Rtl3Q6P1Y1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rtl3Q6P1Y1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.42■□□□□ 0.54
Rtl3Q6P1Y1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.42■□□□□ 0.54
Rtl3Q6P1Y1 Gm10138-203ENSMUST00000206952 366 ntBASIC18.42■□□□□ 0.54
Rtl3Q6P1Y1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.42■□□□□ 0.54
Rtl3Q6P1Y1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtl3Q6P1Y1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtl3Q6P1Y1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtl3Q6P1Y1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtl3Q6P1Y1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtl3Q6P1Y1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtl3Q6P1Y1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rtl3Q6P1Y1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms