Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt39Q6IFX4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt39Q6IFX4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt39Q6IFX4 Idnk-204ENSMUST00000226010 1898 ntBASIC19.76■□□□□ 0.75
Krt39Q6IFX4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.76■□□□□ 0.75
Krt39Q6IFX4 Gm10033-202ENSMUST00000211874 928 ntBASIC19.76■□□□□ 0.75
Krt39Q6IFX4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt39Q6IFX4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt39Q6IFX4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Krt39Q6IFX4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Krt39Q6IFX4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt39Q6IFX4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt39Q6IFX4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Krt39Q6IFX4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt39Q6IFX4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Krt39Q6IFX4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Krt39Q6IFX4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Krt39Q6IFX4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Krt39Q6IFX4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Krt39Q6IFX4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.75■□□□□ 0.75
Krt39Q6IFX4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Krt39Q6IFX4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Krt39Q6IFX4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Krt39Q6IFX4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Krt39Q6IFX4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Krt39Q6IFX4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.74■□□□□ 0.75
Krt39Q6IFX4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Krt39Q6IFX4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Krt39Q6IFX4 Gm26571-201ENSMUST00000181399 666 ntBASIC19.74■□□□□ 0.75
Krt39Q6IFX4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.74■□□□□ 0.75
Krt39Q6IFX4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Krt39Q6IFX4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Krt39Q6IFX4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Krt39Q6IFX4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Krt39Q6IFX4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Krt39Q6IFX4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Krt39Q6IFX4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.74■□□□□ 0.75
Krt39Q6IFX4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Krt39Q6IFX4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Krt39Q6IFX4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Krt39Q6IFX4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Krt39Q6IFX4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Krt39Q6IFX4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.73■□□□□ 0.75
Krt39Q6IFX4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Krt39Q6IFX4 AV356131-201ENSMUST00000206201 750 ntBASIC19.73■□□□□ 0.75
Krt39Q6IFX4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Krt39Q6IFX4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Krt39Q6IFX4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Krt39Q6IFX4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.73■□□□□ 0.75
Krt39Q6IFX4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Krt39Q6IFX4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Krt39Q6IFX4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Krt39Q6IFX4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Krt39Q6IFX4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Krt39Q6IFX4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Krt39Q6IFX4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Krt39Q6IFX4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Krt39Q6IFX4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.72■□□□□ 0.75
Krt39Q6IFX4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Krt39Q6IFX4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Krt39Q6IFX4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Krt39Q6IFX4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Krt39Q6IFX4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.72■□□□□ 0.75
Krt39Q6IFX4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Krt39Q6IFX4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.72■□□□□ 0.75
Krt39Q6IFX4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Krt39Q6IFX4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Krt39Q6IFX4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Krt39Q6IFX4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Krt39Q6IFX4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Krt39Q6IFX4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Krt39Q6IFX4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Krt39Q6IFX4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.71■□□□□ 0.75
Krt39Q6IFX4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Krt39Q6IFX4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Krt39Q6IFX4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Krt39Q6IFX4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Krt39Q6IFX4 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.71■□□□□ 0.75
Krt39Q6IFX4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Krt39Q6IFX4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Krt39Q6IFX4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Krt39Q6IFX4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Krt39Q6IFX4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Krt39Q6IFX4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Krt39Q6IFX4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Krt39Q6IFX4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Krt39Q6IFX4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Krt39Q6IFX4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Krt39Q6IFX4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Krt39Q6IFX4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Krt39Q6IFX4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Krt39Q6IFX4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.7■□□□□ 0.74
Krt39Q6IFX4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.7■□□□□ 0.74
Krt39Q6IFX4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Krt39Q6IFX4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Krt39Q6IFX4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Krt39Q6IFX4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Krt39Q6IFX4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Krt39Q6IFX4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.69■□□□□ 0.74
Krt39Q6IFX4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms