Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Best3Q6H1V1 Gm14859-201ENSMUST00000117752 357 ntBASIC21.26■□□□□ 0.99
Best3Q6H1V1 Mir1668-201ENSMUST00000184114 107 ntBASIC21.26■□□□□ 0.99
Best3Q6H1V1 Gm29791-202ENSMUST00000207888 369 ntBASIC21.26■□□□□ 0.99
Best3Q6H1V1 Gm21559-201ENSMUST00000220638 855 ntBASIC21.26■□□□□ 0.99
Best3Q6H1V1 Gm8587-201ENSMUST00000076538 843 ntBASIC21.26■□□□□ 0.99
Best3Q6H1V1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Best3Q6H1V1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Best3Q6H1V1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Best3Q6H1V1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Best3Q6H1V1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Best3Q6H1V1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.26■□□□□ 0.99
Best3Q6H1V1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Best3Q6H1V1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Best3Q6H1V1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Best3Q6H1V1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Best3Q6H1V1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Best3Q6H1V1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.25■□□□□ 0.99
Best3Q6H1V1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.25■□□□□ 0.99
Best3Q6H1V1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Best3Q6H1V1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC21.25■□□□□ 0.99
Best3Q6H1V1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Best3Q6H1V1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Best3Q6H1V1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Best3Q6H1V1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Best3Q6H1V1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC21.25■□□□□ 0.99
Best3Q6H1V1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Best3Q6H1V1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Best3Q6H1V1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Best3Q6H1V1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Best3Q6H1V1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Best3Q6H1V1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Best3Q6H1V1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Best3Q6H1V1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Best3Q6H1V1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Best3Q6H1V1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Best3Q6H1V1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Best3Q6H1V1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Best3Q6H1V1 Il3ra-202ENSMUST00000223589 738 ntBASIC21.24■□□□□ 0.99
Best3Q6H1V1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Best3Q6H1V1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Best3Q6H1V1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Best3Q6H1V1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Best3Q6H1V1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Best3Q6H1V1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC21.23■□□□□ 0.99
Best3Q6H1V1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC21.23■□□□□ 0.99
Best3Q6H1V1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Best3Q6H1V1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Best3Q6H1V1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Best3Q6H1V1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Best3Q6H1V1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Best3Q6H1V1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Best3Q6H1V1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Best3Q6H1V1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Best3Q6H1V1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC21.22■□□□□ 0.99
Best3Q6H1V1 Gm5587-201ENSMUST00000206270 674 ntBASIC21.22■□□□□ 0.99
Best3Q6H1V1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Best3Q6H1V1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Best3Q6H1V1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Best3Q6H1V1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Best3Q6H1V1 Spsb2-203ENSMUST00000112473 1322 ntBASIC21.22■□□□□ 0.99
Best3Q6H1V1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Best3Q6H1V1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Best3Q6H1V1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Best3Q6H1V1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.21■□□□□ 0.99
Best3Q6H1V1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Best3Q6H1V1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Best3Q6H1V1 Gm7284-201ENSMUST00000131667 944 ntBASIC21.21■□□□□ 0.99
Best3Q6H1V1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
Best3Q6H1V1 Gm9731-201ENSMUST00000209480 747 ntBASIC21.21■□□□□ 0.99
Best3Q6H1V1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC21.21■□□□□ 0.99
Best3Q6H1V1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Best3Q6H1V1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Best3Q6H1V1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Best3Q6H1V1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Best3Q6H1V1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Best3Q6H1V1 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.2■□□□□ 0.98
Best3Q6H1V1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Best3Q6H1V1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.2■□□□□ 0.98
Best3Q6H1V1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Best3Q6H1V1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Best3Q6H1V1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Best3Q6H1V1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Best3Q6H1V1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Best3Q6H1V1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Best3Q6H1V1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Best3Q6H1V1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Best3Q6H1V1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Best3Q6H1V1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.2■□□□□ 0.98
Best3Q6H1V1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Best3Q6H1V1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Best3Q6H1V1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Best3Q6H1V1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Best3Q6H1V1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Best3Q6H1V1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Best3Q6H1V1 Gm9013-201ENSMUST00000132939 882 ntBASIC21.19■□□□□ 0.98
Best3Q6H1V1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC21.19■□□□□ 0.98
Best3Q6H1V1 Gm27389-201ENSMUST00000183622 195 ntBASIC21.19■□□□□ 0.98
Best3Q6H1V1 Gm37025-201ENSMUST00000195159 829 ntBASIC21.19■□□□□ 0.98
Best3Q6H1V1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms