Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Gm9731-201ENSMUST00000209480 747 ntBASIC21.3■■□□□ 1
Ltn1Q6A009 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ltn1Q6A009 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ltn1Q6A009 Gm7638-201ENSMUST00000121348 967 ntBASIC21.29■■□□□ 1
Ltn1Q6A009 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ltn1Q6A009 Gm9013-201ENSMUST00000132939 882 ntBASIC21.29■■□□□ 1
Ltn1Q6A009 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Ltn1Q6A009 Gm9694-201ENSMUST00000193347 1189 ntBASIC21.29■■□□□ 1
Ltn1Q6A009 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ltn1Q6A009 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ltn1Q6A009 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ltn1Q6A009 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ltn1Q6A009 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ltn1Q6A009 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ltn1Q6A009 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.28■■□□□ 1
Ltn1Q6A009 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ltn1Q6A009 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ltn1Q6A009 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ltn1Q6A009 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ltn1Q6A009 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ltn1Q6A009 Gm24841-201ENSMUST00000158676 357 ntBASIC21.28■■□□□ 1
Ltn1Q6A009 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ltn1Q6A009 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ltn1Q6A009 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ltn1Q6A009 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ltn1Q6A009 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ltn1Q6A009 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ltn1Q6A009 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ltn1Q6A009 Gm17661-201ENSMUST00000170317 270 ntBASIC21.27■■□□□ 1
Ltn1Q6A009 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ltn1Q6A009 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.27■■□□□ 1
Ltn1Q6A009 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ltn1Q6A009 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ltn1Q6A009 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ltn1Q6A009 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Ltn1Q6A009 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ltn1Q6A009 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ltn1Q6A009 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ltn1Q6A009 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ltn1Q6A009 AC159205.3-201ENSMUST00000224614 874 ntBASIC21.26■□□□□ 0.99
Ltn1Q6A009 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Ltn1Q6A009 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ltn1Q6A009 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ltn1Q6A009 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ltn1Q6A009 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ltn1Q6A009 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Ltn1Q6A009 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Ltn1Q6A009 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ltn1Q6A009 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ltn1Q6A009 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Ltn1Q6A009 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ltn1Q6A009 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.25■□□□□ 0.99
Ltn1Q6A009 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ltn1Q6A009 Gm37025-201ENSMUST00000195159 829 ntBASIC21.25■□□□□ 0.99
Ltn1Q6A009 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ltn1Q6A009 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ltn1Q6A009 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ltn1Q6A009 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ltn1Q6A009 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.24■□□□□ 0.99
Ltn1Q6A009 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ltn1Q6A009 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ltn1Q6A009 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ltn1Q6A009 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ltn1Q6A009 Gm28033-201ENSMUST00000184224 96 ntBASIC21.24■□□□□ 0.99
Ltn1Q6A009 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC21.24■□□□□ 0.99
Ltn1Q6A009 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC21.24■□□□□ 0.99
Ltn1Q6A009 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ltn1Q6A009 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ltn1Q6A009 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ltn1Q6A009 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ltn1Q6A009 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ltn1Q6A009 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ltn1Q6A009 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ltn1Q6A009 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ltn1Q6A009 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ltn1Q6A009 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ltn1Q6A009 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC21.23■□□□□ 0.99
Ltn1Q6A009 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ltn1Q6A009 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ltn1Q6A009 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ltn1Q6A009 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ltn1Q6A009 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ltn1Q6A009 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ltn1Q6A009 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ltn1Q6A009 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ltn1Q6A009 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ltn1Q6A009 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC21.23■□□□□ 0.99
Ltn1Q6A009 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ltn1Q6A009 Gm29791-202ENSMUST00000207888 369 ntBASIC21.23■□□□□ 0.99
Ltn1Q6A009 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ltn1Q6A009 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ltn1Q6A009 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
Ltn1Q6A009 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ltn1Q6A009 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.22■□□□□ 0.99
Ltn1Q6A009 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Ltn1Q6A009 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ltn1Q6A009 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.22■□□□□ 0.99
Ltn1Q6A009 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ltn1Q6A009 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ltn1Q6A009 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms