Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Six1Q62231 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.37■□□□□ 0.53
Six1Q62231 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
Six1Q62231 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Six1Q62231 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Six1Q62231 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Six1Q62231 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Six1Q62231 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.37■□□□□ 0.53
Six1Q62231 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.36■□□□□ 0.53
Six1Q62231 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Six1Q62231 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Six1Q62231 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.36■□□□□ 0.53
Six1Q62231 Gm26571-201ENSMUST00000181399 666 ntBASIC18.36■□□□□ 0.53
Six1Q62231 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Six1Q62231 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Six1Q62231 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Six1Q62231 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Six1Q62231 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Six1Q62231 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.36■□□□□ 0.53
Six1Q62231 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Six1Q62231 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Six1Q62231 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.35■□□□□ 0.53
Six1Q62231 Gm38285-201ENSMUST00000192928 922 ntBASIC18.35■□□□□ 0.53
Six1Q62231 Gm6365-201ENSMUST00000054711 744 ntBASIC18.35■□□□□ 0.53
Six1Q62231 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Six1Q62231 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Six1Q62231 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Six1Q62231 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Six1Q62231 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Six1Q62231 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Six1Q62231 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Six1Q62231 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.35■□□□□ 0.53
Six1Q62231 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.34■□□□□ 0.53
Six1Q62231 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Six1Q62231 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six1Q62231 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Six1Q62231 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six1Q62231 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six1Q62231 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Six1Q62231 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.34■□□□□ 0.53
Six1Q62231 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.34■□□□□ 0.53
Six1Q62231 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Six1Q62231 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six1Q62231 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Six1Q62231 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six1Q62231 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six1Q62231 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six1Q62231 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six1Q62231 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.34■□□□□ 0.53
Six1Q62231 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Six1Q62231 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Six1Q62231 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Six1Q62231 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Six1Q62231 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Six1Q62231 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Six1Q62231 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Six1Q62231 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Six1Q62231 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Six1Q62231 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Six1Q62231 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Six1Q62231 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Six1Q62231 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Six1Q62231 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Six1Q62231 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Six1Q62231 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Six1Q62231 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Six1Q62231 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Six1Q62231 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Six1Q62231 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.32■□□□□ 0.52
Six1Q62231 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.32■□□□□ 0.52
Six1Q62231 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Six1Q62231 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Six1Q62231 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Six1Q62231 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six1Q62231 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.31■□□□□ 0.52
Six1Q62231 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six1Q62231 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six1Q62231 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six1Q62231 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six1Q62231 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Six1Q62231 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six1Q62231 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six1Q62231 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.31■□□□□ 0.52
Six1Q62231 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Six1Q62231 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Six1Q62231 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six1Q62231 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Six1Q62231 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Six1Q62231 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six1Q62231 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.31■□□□□ 0.52
Six1Q62231 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Six1Q62231 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Six1Q62231 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Six1Q62231 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six1Q62231 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six1Q62231 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Six1Q62231 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six1Q62231 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.3■□□□□ 0.52
Six1Q62231 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.3■□□□□ 0.52
Six1Q62231 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms