Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ecm1Q61508 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ecm1Q61508 Gm24841-201ENSMUST00000158676 357 ntBASIC19.88■□□□□ 0.77
Ecm1Q61508 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ecm1Q61508 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ecm1Q61508 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ecm1Q61508 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Ecm1Q61508 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ecm1Q61508 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Ecm1Q61508 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ecm1Q61508 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ecm1Q61508 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ecm1Q61508 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ecm1Q61508 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ecm1Q61508 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.87■□□□□ 0.77
Ecm1Q61508 Gm7791-201ENSMUST00000219066 539 ntBASIC19.87■□□□□ 0.77
Ecm1Q61508 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ecm1Q61508 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ecm1Q61508 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ecm1Q61508 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ecm1Q61508 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ecm1Q61508 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ecm1Q61508 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ecm1Q61508 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Ecm1Q61508 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ecm1Q61508 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.87■□□□□ 0.77
Ecm1Q61508 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ecm1Q61508 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ecm1Q61508 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ecm1Q61508 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ecm1Q61508 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ecm1Q61508 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ecm1Q61508 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ecm1Q61508 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ecm1Q61508 Tgds-204ENSMUST00000228543 1594 ntBASIC19.86■□□□□ 0.77
Ecm1Q61508 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ecm1Q61508 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.85■□□□□ 0.77
Ecm1Q61508 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ecm1Q61508 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ecm1Q61508 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Ecm1Q61508 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ecm1Q61508 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Ecm1Q61508 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ecm1Q61508 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ecm1Q61508 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ecm1Q61508 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ecm1Q61508 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ecm1Q61508 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ecm1Q61508 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Ecm1Q61508 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ecm1Q61508 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ecm1Q61508 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ecm1Q61508 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ecm1Q61508 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ecm1Q61508 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Ecm1Q61508 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ecm1Q61508 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ecm1Q61508 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.84■□□□□ 0.77
Ecm1Q61508 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ecm1Q61508 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ecm1Q61508 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Ecm1Q61508 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ecm1Q61508 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Ecm1Q61508 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ecm1Q61508 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Ecm1Q61508 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ecm1Q61508 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ecm1Q61508 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ecm1Q61508 Gm13474-201ENSMUST00000122466 815 ntBASIC19.83■□□□□ 0.77
Ecm1Q61508 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ecm1Q61508 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Ecm1Q61508 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ecm1Q61508 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ecm1Q61508 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Ecm1Q61508 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Ecm1Q61508 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ecm1Q61508 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ecm1Q61508 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Ecm1Q61508 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ecm1Q61508 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ecm1Q61508 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.82■□□□□ 0.76
Ecm1Q61508 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ecm1Q61508 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ecm1Q61508 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ecm1Q61508 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ecm1Q61508 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ecm1Q61508 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ecm1Q61508 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ecm1Q61508 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ecm1Q61508 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ecm1Q61508 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ecm1Q61508 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ecm1Q61508 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ecm1Q61508 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.81■□□□□ 0.76
Ecm1Q61508 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ecm1Q61508 Gm25016-201ENSMUST00000158399 131 ntBASIC19.81■□□□□ 0.76
Ecm1Q61508 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ecm1Q61508 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ecm1Q61508 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ecm1Q61508 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms