Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ift88Q61371 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.79■□□□□ 0.76
Ift88Q61371 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.79■□□□□ 0.76
Ift88Q61371 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ift88Q61371 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ift88Q61371 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
Ift88Q61371 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ift88Q61371 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Ift88Q61371 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ift88Q61371 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ift88Q61371 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ift88Q61371 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ift88Q61371 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ift88Q61371 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ift88Q61371 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ift88Q61371 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ift88Q61371 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ift88Q61371 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ift88Q61371 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ift88Q61371 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ift88Q61371 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ift88Q61371 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ift88Q61371 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ift88Q61371 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ift88Q61371 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.78■□□□□ 0.76
Ift88Q61371 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ift88Q61371 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ift88Q61371 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ift88Q61371 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ift88Q61371 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ift88Q61371 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ift88Q61371 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ift88Q61371 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ift88Q61371 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ift88Q61371 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ift88Q61371 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ift88Q61371 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ift88Q61371 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Ift88Q61371 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.77■□□□□ 0.76
Ift88Q61371 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.77■□□□□ 0.76
Ift88Q61371 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.77■□□□□ 0.76
Ift88Q61371 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ift88Q61371 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Ift88Q61371 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ift88Q61371 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
Ift88Q61371 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ift88Q61371 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ift88Q61371 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ift88Q61371 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ift88Q61371 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ift88Q61371 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ift88Q61371 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ift88Q61371 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ift88Q61371 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ift88Q61371 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.76■□□□□ 0.75
Ift88Q61371 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ift88Q61371 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ift88Q61371 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.76■□□□□ 0.75
Ift88Q61371 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ift88Q61371 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ift88Q61371 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ift88Q61371 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ift88Q61371 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ift88Q61371 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ift88Q61371 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ift88Q61371 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ift88Q61371 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ift88Q61371 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ift88Q61371 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ift88Q61371 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ift88Q61371 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ift88Q61371 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ift88Q61371 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
Ift88Q61371 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ift88Q61371 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ift88Q61371 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.75■□□□□ 0.75
Ift88Q61371 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.75■□□□□ 0.75
Ift88Q61371 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ift88Q61371 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.75■□□□□ 0.75
Ift88Q61371 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ift88Q61371 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ift88Q61371 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.74■□□□□ 0.75
Ift88Q61371 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.74■□□□□ 0.75
Ift88Q61371 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ift88Q61371 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ift88Q61371 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ift88Q61371 Idnk-204ENSMUST00000226010 1898 ntBASIC19.74■□□□□ 0.75
Ift88Q61371 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ift88Q61371 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.74■□□□□ 0.75
Ift88Q61371 Gm7514-201ENSMUST00000209475 934 ntBASIC19.74■□□□□ 0.75
Ift88Q61371 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ift88Q61371 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ift88Q61371 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ift88Q61371 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ift88Q61371 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ift88Q61371 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ift88Q61371 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ift88Q61371 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ift88Q61371 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ift88Q61371 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms