Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Cacna1eQ61290 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Cacna1eQ61290 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.61■□□□□ 0.41
Cacna1eQ61290 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1eQ61290 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1eQ61290 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1eQ61290 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1eQ61290 Golph3-205ENSMUST00000228671 2842 ntBASIC17.61■□□□□ 0.41
Cacna1eQ61290 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1eQ61290 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1eQ61290 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1eQ61290 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1eQ61290 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1eQ61290 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cacna1eQ61290 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1eQ61290 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.6■□□□□ 0.41
Cacna1eQ61290 Gm5587-201ENSMUST00000206270 674 ntBASIC17.6■□□□□ 0.41
Cacna1eQ61290 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.6■□□□□ 0.41
Cacna1eQ61290 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1eQ61290 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1eQ61290 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1eQ61290 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Cacna1eQ61290 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.6■□□□□ 0.41
Cacna1eQ61290 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1eQ61290 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1eQ61290 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.59■□□□□ 0.41
Cacna1eQ61290 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1eQ61290 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1eQ61290 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1eQ61290 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cacna1eQ61290 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1eQ61290 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1eQ61290 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cacna1eQ61290 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.59■□□□□ 0.41
Cacna1eQ61290 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1eQ61290 Gm7638-201ENSMUST00000121348 967 ntBASIC17.59■□□□□ 0.41
Cacna1eQ61290 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.59■□□□□ 0.41
Cacna1eQ61290 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1eQ61290 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cacna1eQ61290 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cacna1eQ61290 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cacna1eQ61290 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1eQ61290 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cacna1eQ61290 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1eQ61290 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1eQ61290 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1eQ61290 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cacna1eQ61290 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1eQ61290 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1eQ61290 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1eQ61290 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cacna1eQ61290 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1eQ61290 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1eQ61290 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1eQ61290 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1eQ61290 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.58■□□□□ 0.4
Cacna1eQ61290 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.58■□□□□ 0.4
Cacna1eQ61290 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1eQ61290 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1eQ61290 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1eQ61290 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1eQ61290 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1eQ61290 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1eQ61290 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1eQ61290 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1eQ61290 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1eQ61290 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1eQ61290 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1eQ61290 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1eQ61290 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1eQ61290 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.57■□□□□ 0.4
Cacna1eQ61290 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1eQ61290 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1eQ61290 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.56■□□□□ 0.4
Cacna1eQ61290 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.56■□□□□ 0.4
Cacna1eQ61290 Gm9013-201ENSMUST00000132939 882 ntBASIC17.56■□□□□ 0.4
Cacna1eQ61290 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1eQ61290 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1eQ61290 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1eQ61290 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1eQ61290 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cacna1eQ61290 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1eQ61290 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1eQ61290 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1eQ61290 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1eQ61290 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1eQ61290 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1eQ61290 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cacna1eQ61290 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1eQ61290 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1eQ61290 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cacna1eQ61290 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.55■□□□□ 0.4
Cacna1eQ61290 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1eQ61290 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Cacna1eQ61290 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.55■□□□□ 0.4
Cacna1eQ61290 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.55■□□□□ 0.4
Cacna1eQ61290 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1eQ61290 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cacna1eQ61290 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1eQ61290 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms