Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.16■□□□□ 0.5
Sdf4Q61112 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sdf4Q61112 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sdf4Q61112 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sdf4Q61112 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sdf4Q61112 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sdf4Q61112 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sdf4Q61112 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sdf4Q61112 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Sdf4Q61112 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sdf4Q61112 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.15■□□□□ 0.5
Sdf4Q61112 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.15■□□□□ 0.5
Sdf4Q61112 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdf4Q61112 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.15■□□□□ 0.5
Sdf4Q61112 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.15■□□□□ 0.5
Sdf4Q61112 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.15■□□□□ 0.5
Sdf4Q61112 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdf4Q61112 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdf4Q61112 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.15■□□□□ 0.5
Sdf4Q61112 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.15■□□□□ 0.5
Sdf4Q61112 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Sdf4Q61112 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdf4Q61112 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdf4Q61112 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Sdf4Q61112 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
Sdf4Q61112 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sdf4Q61112 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdf4Q61112 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sdf4Q61112 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdf4Q61112 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Sdf4Q61112 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.14■□□□□ 0.49
Sdf4Q61112 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdf4Q61112 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdf4Q61112 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdf4Q61112 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdf4Q61112 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdf4Q61112 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdf4Q61112 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdf4Q61112 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdf4Q61112 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdf4Q61112 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdf4Q61112 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.13■□□□□ 0.49
Sdf4Q61112 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.13■□□□□ 0.49
Sdf4Q61112 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdf4Q61112 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdf4Q61112 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Sdf4Q61112 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Sdf4Q61112 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdf4Q61112 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdf4Q61112 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.12■□□□□ 0.49
Sdf4Q61112 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Sdf4Q61112 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sdf4Q61112 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdf4Q61112 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdf4Q61112 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Sdf4Q61112 Gm11927-201ENSMUST00000118472 759 ntBASIC18.12■□□□□ 0.49
Sdf4Q61112 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdf4Q61112 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.12■□□□□ 0.49
Sdf4Q61112 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sdf4Q61112 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdf4Q61112 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdf4Q61112 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Sdf4Q61112 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdf4Q61112 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdf4Q61112 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.12■□□□□ 0.49
Sdf4Q61112 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdf4Q61112 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Sdf4Q61112 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdf4Q61112 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sdf4Q61112 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Sdf4Q61112 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdf4Q61112 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdf4Q61112 Gm12896-201ENSMUST00000118430 226 ntBASIC18.11■□□□□ 0.49
Sdf4Q61112 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.11■□□□□ 0.49
Sdf4Q61112 Gm29257-201ENSMUST00000186115 639 ntBASIC18.11■□□□□ 0.49
Sdf4Q61112 Dio3-201ENSMUST00000097228 1449 ntBASIC18.11■□□□□ 0.49
Sdf4Q61112 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdf4Q61112 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sdf4Q61112 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdf4Q61112 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Sdf4Q61112 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdf4Q61112 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdf4Q61112 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdf4Q61112 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdf4Q61112 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdf4Q61112 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdf4Q61112 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sdf4Q61112 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdf4Q61112 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdf4Q61112 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.1■□□□□ 0.49
Sdf4Q61112 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.1■□□□□ 0.49
Sdf4Q61112 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdf4Q61112 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdf4Q61112 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdf4Q61112 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
Sdf4Q61112 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdf4Q61112 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdf4Q61112 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Sdf4Q61112 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.09■□□□□ 0.49
Sdf4Q61112 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms