Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.85■■□□□ 1.09
Ubr3Q5U430 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ubr3Q5U430 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC21.85■■□□□ 1.09
Ubr3Q5U430 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC21.85■■□□□ 1.09
Ubr3Q5U430 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ubr3Q5U430 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Ubr3Q5U430 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC21.85■■□□□ 1.09
Ubr3Q5U430 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ubr3Q5U430 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ubr3Q5U430 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Ubr3Q5U430 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ubr3Q5U430 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ubr3Q5U430 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ubr3Q5U430 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ubr3Q5U430 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC21.84■■□□□ 1.09
Ubr3Q5U430 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ubr3Q5U430 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ubr3Q5U430 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ubr3Q5U430 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ubr3Q5U430 Gm29791-202ENSMUST00000207888 369 ntBASIC21.83■■□□□ 1.09
Ubr3Q5U430 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ubr3Q5U430 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ubr3Q5U430 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ubr3Q5U430 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC21.83■■□□□ 1.08
Ubr3Q5U430 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ubr3Q5U430 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ubr3Q5U430 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ubr3Q5U430 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ubr3Q5U430 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ubr3Q5U430 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ubr3Q5U430 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ubr3Q5U430 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ubr3Q5U430 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Ubr3Q5U430 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ubr3Q5U430 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ubr3Q5U430 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ubr3Q5U430 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ubr3Q5U430 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ubr3Q5U430 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ubr3Q5U430 Tgds-204ENSMUST00000228543 1594 ntBASIC21.81■■□□□ 1.08
Ubr3Q5U430 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ubr3Q5U430 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
Ubr3Q5U430 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ubr3Q5U430 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Ubr3Q5U430 Actl10-202ENSMUST00000226583 1501 ntBASIC21.81■■□□□ 1.08
Ubr3Q5U430 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ubr3Q5U430 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ubr3Q5U430 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ubr3Q5U430 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ubr3Q5U430 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ubr3Q5U430 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ubr3Q5U430 AW822252-206ENSMUST00000208904 237 ntBASIC21.81■■□□□ 1.08
Ubr3Q5U430 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC21.81■■□□□ 1.08
Ubr3Q5U430 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ubr3Q5U430 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.81■■□□□ 1.08
Ubr3Q5U430 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ubr3Q5U430 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ubr3Q5U430 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ubr3Q5U430 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC21.8■■□□□ 1.08
Ubr3Q5U430 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ubr3Q5U430 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
Ubr3Q5U430 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Ubr3Q5U430 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ubr3Q5U430 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Ubr3Q5U430 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ubr3Q5U430 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ubr3Q5U430 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ubr3Q5U430 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC21.79■■□□□ 1.08
Ubr3Q5U430 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
Ubr3Q5U430 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC21.79■■□□□ 1.08
Ubr3Q5U430 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Ubr3Q5U430 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ubr3Q5U430 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ubr3Q5U430 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ubr3Q5U430 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ubr3Q5U430 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.79■■□□□ 1.08
Ubr3Q5U430 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ubr3Q5U430 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.79■■□□□ 1.08
Ubr3Q5U430 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.78■■□□□ 1.08
Ubr3Q5U430 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ubr3Q5U430 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ubr3Q5U430 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ubr3Q5U430 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC21.78■■□□□ 1.08
Ubr3Q5U430 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ubr3Q5U430 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ubr3Q5U430 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ubr3Q5U430 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ubr3Q5U430 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ubr3Q5U430 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ubr3Q5U430 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC21.77■■□□□ 1.08
Ubr3Q5U430 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ubr3Q5U430 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Ubr3Q5U430 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC21.77■■□□□ 1.08
Ubr3Q5U430 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.77■■□□□ 1.08
Ubr3Q5U430 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ubr3Q5U430 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ubr3Q5U430 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ubr3Q5U430 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ubr3Q5U430 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ubr3Q5U430 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms