Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Shroom1Q5SX79 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Shroom1Q5SX79 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shroom1Q5SX79 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shroom1Q5SX79 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shroom1Q5SX79 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Shroom1Q5SX79 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Shroom1Q5SX79 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shroom1Q5SX79 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shroom1Q5SX79 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shroom1Q5SX79 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shroom1Q5SX79 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.01■□□□□ 0.63
Shroom1Q5SX79 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Shroom1Q5SX79 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Shroom1Q5SX79 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shroom1Q5SX79 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shroom1Q5SX79 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.01■□□□□ 0.63
Shroom1Q5SX79 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shroom1Q5SX79 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19■□□□□ 0.63
Shroom1Q5SX79 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Shroom1Q5SX79 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Shroom1Q5SX79 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
Shroom1Q5SX79 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shroom1Q5SX79 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Shroom1Q5SX79 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Shroom1Q5SX79 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Shroom1Q5SX79 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19■□□□□ 0.63
Shroom1Q5SX79 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Shroom1Q5SX79 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Shroom1Q5SX79 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Shroom1Q5SX79 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shroom1Q5SX79 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Shroom1Q5SX79 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shroom1Q5SX79 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Shroom1Q5SX79 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19■□□□□ 0.63
Shroom1Q5SX79 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shroom1Q5SX79 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Shroom1Q5SX79 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Shroom1Q5SX79 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Shroom1Q5SX79 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Shroom1Q5SX79 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shroom1Q5SX79 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.99■□□□□ 0.63
Shroom1Q5SX79 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shroom1Q5SX79 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shroom1Q5SX79 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.99■□□□□ 0.63
Shroom1Q5SX79 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shroom1Q5SX79 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Shroom1Q5SX79 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Shroom1Q5SX79 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shroom1Q5SX79 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shroom1Q5SX79 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shroom1Q5SX79 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shroom1Q5SX79 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shroom1Q5SX79 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Shroom1Q5SX79 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Shroom1Q5SX79 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Shroom1Q5SX79 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.98■□□□□ 0.63
Shroom1Q5SX79 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.98■□□□□ 0.63
Shroom1Q5SX79 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shroom1Q5SX79 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shroom1Q5SX79 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shroom1Q5SX79 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shroom1Q5SX79 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Shroom1Q5SX79 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.98■□□□□ 0.63
Shroom1Q5SX79 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Shroom1Q5SX79 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.98■□□□□ 0.63
Shroom1Q5SX79 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shroom1Q5SX79 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Shroom1Q5SX79 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Shroom1Q5SX79 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.98■□□□□ 0.63
Shroom1Q5SX79 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shroom1Q5SX79 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Shroom1Q5SX79 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shroom1Q5SX79 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shroom1Q5SX79 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.97■□□□□ 0.63
Shroom1Q5SX79 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Shroom1Q5SX79 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.97■□□□□ 0.63
Shroom1Q5SX79 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.97■□□□□ 0.63
Shroom1Q5SX79 Gm5417-201ENSMUST00000079706 384 ntBASIC18.97■□□□□ 0.63
Shroom1Q5SX79 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shroom1Q5SX79 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Shroom1Q5SX79 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.97■□□□□ 0.63
Shroom1Q5SX79 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shroom1Q5SX79 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shroom1Q5SX79 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shroom1Q5SX79 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shroom1Q5SX79 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shroom1Q5SX79 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shroom1Q5SX79 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shroom1Q5SX79 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Shroom1Q5SX79 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.96■□□□□ 0.63
Shroom1Q5SX79 Gm37292-201ENSMUST00000192062 758 ntBASIC18.96■□□□□ 0.63
Shroom1Q5SX79 Gm42545-201ENSMUST00000202755 922 ntBASIC18.96■□□□□ 0.63
Shroom1Q5SX79 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.96■□□□□ 0.63
Shroom1Q5SX79 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Shroom1Q5SX79 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shroom1Q5SX79 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Shroom1Q5SX79 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shroom1Q5SX79 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.96■□□□□ 0.63
Shroom1Q5SX79 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms