Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav2Q5R1I9 Mir1199-201ENSMUST00000117015 119 ntBASIC14.26□□□□□ -0.13
Trav2Q5R1I9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav2Q5R1I9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav2Q5R1I9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.26□□□□□ -0.13
Trav2Q5R1I9 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.26□□□□□ -0.13
Trav2Q5R1I9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav2Q5R1I9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav2Q5R1I9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav2Q5R1I9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav2Q5R1I9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav2Q5R1I9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trav2Q5R1I9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Trav2Q5R1I9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav2Q5R1I9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Trav2Q5R1I9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav2Q5R1I9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav2Q5R1I9 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.25□□□□□ -0.13
Trav2Q5R1I9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav2Q5R1I9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav2Q5R1I9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav2Q5R1I9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav2Q5R1I9 Mir6982-201ENSMUST00000184354 68 ntBASIC14.25□□□□□ -0.13
Trav2Q5R1I9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav2Q5R1I9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav2Q5R1I9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav2Q5R1I9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.25□□□□□ -0.13
Trav2Q5R1I9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav2Q5R1I9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav2Q5R1I9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav2Q5R1I9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav2Q5R1I9 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.25□□□□□ -0.13
Trav2Q5R1I9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav2Q5R1I9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav2Q5R1I9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav2Q5R1I9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav2Q5R1I9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav2Q5R1I9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Trav2Q5R1I9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav2Q5R1I9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav2Q5R1I9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.24□□□□□ -0.13
Trav2Q5R1I9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.24□□□□□ -0.13
Trav2Q5R1I9 Gm18025-201ENSMUST00000221733 862 ntBASIC14.24□□□□□ -0.13
Trav2Q5R1I9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav2Q5R1I9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav2Q5R1I9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav2Q5R1I9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav2Q5R1I9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav2Q5R1I9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav2Q5R1I9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav2Q5R1I9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav2Q5R1I9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav2Q5R1I9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav2Q5R1I9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav2Q5R1I9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav2Q5R1I9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav2Q5R1I9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav2Q5R1I9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav2Q5R1I9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav2Q5R1I9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav2Q5R1I9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav2Q5R1I9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav2Q5R1I9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav2Q5R1I9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav2Q5R1I9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav2Q5R1I9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav2Q5R1I9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav2Q5R1I9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav2Q5R1I9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav2Q5R1I9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trav2Q5R1I9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms