Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-3Q5R1I1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-3Q5R1I1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav7d-3Q5R1I1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-3Q5R1I1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-3Q5R1I1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-3Q5R1I1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-3Q5R1I1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav7d-3Q5R1I1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-3Q5R1I1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav7d-3Q5R1I1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav7d-3Q5R1I1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-3Q5R1I1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-3Q5R1I1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-3Q5R1I1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-3Q5R1I1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-3Q5R1I1 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.16□□□□□ -0.3
Trav7d-3Q5R1I1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Trav7d-3Q5R1I1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-3Q5R1I1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-3Q5R1I1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-3Q5R1I1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav7d-3Q5R1I1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-3Q5R1I1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-3Q5R1I1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-3Q5R1I1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-3Q5R1I1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav7d-3Q5R1I1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-3Q5R1I1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-3Q5R1I1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-3Q5R1I1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav7d-3Q5R1I1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav7d-3Q5R1I1 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.15□□□□□ -0.3
Trav7d-3Q5R1I1 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.15□□□□□ -0.3
Trav7d-3Q5R1I1 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.15□□□□□ -0.3
Trav7d-3Q5R1I1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav7d-3Q5R1I1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-3Q5R1I1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Trav7d-3Q5R1I1 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.15□□□□□ -0.3
Trav7d-3Q5R1I1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-3Q5R1I1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav7d-3Q5R1I1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav7d-3Q5R1I1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.15□□□□□ -0.31
Trav7d-3Q5R1I1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-3Q5R1I1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-3Q5R1I1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-3Q5R1I1 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-3Q5R1I1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav7d-3Q5R1I1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-3Q5R1I1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-3Q5R1I1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-3Q5R1I1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-3Q5R1I1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-3Q5R1I1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav7d-3Q5R1I1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav7d-3Q5R1I1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav7d-3Q5R1I1 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.14□□□□□ -0.31
Trav7d-3Q5R1I1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-3Q5R1I1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-3Q5R1I1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-3Q5R1I1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-3Q5R1I1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-3Q5R1I1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-3Q5R1I1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms