Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-4Q5R1H9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-4Q5R1H9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-4Q5R1H9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-4Q5R1H9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav7d-4Q5R1H9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-4Q5R1H9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-4Q5R1H9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-4Q5R1H9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav7d-4Q5R1H9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-4Q5R1H9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-4Q5R1H9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav7d-4Q5R1H9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav7d-4Q5R1H9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-4Q5R1H9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav7d-4Q5R1H9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-4Q5R1H9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trav7d-4Q5R1H9 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.66□□□□□ -0.22
Trav7d-4Q5R1H9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-4Q5R1H9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-4Q5R1H9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-4Q5R1H9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-4Q5R1H9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-4Q5R1H9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-4Q5R1H9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav7d-4Q5R1H9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-4Q5R1H9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav7d-4Q5R1H9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav7d-4Q5R1H9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-4Q5R1H9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-4Q5R1H9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-4Q5R1H9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-4Q5R1H9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-4Q5R1H9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-4Q5R1H9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav7d-4Q5R1H9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-4Q5R1H9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-4Q5R1H9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-4Q5R1H9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav7d-4Q5R1H9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-4Q5R1H9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trav7d-4Q5R1H9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC13.65□□□□□ -0.22
Trav7d-4Q5R1H9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav7d-4Q5R1H9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-4Q5R1H9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-4Q5R1H9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC13.65□□□□□ -0.22
Trav7d-4Q5R1H9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-4Q5R1H9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav7d-4Q5R1H9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav7d-4Q5R1H9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav7d-4Q5R1H9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-4Q5R1H9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-4Q5R1H9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-4Q5R1H9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-4Q5R1H9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Trav7d-4Q5R1H9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trav7d-4Q5R1H9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trav7d-4Q5R1H9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-4Q5R1H9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-4Q5R1H9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-4Q5R1H9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav7d-4Q5R1H9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-4Q5R1H9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-4Q5R1H9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav7d-4Q5R1H9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav7d-4Q5R1H9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav7d-4Q5R1H9 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.64□□□□□ -0.23
Trav7d-4Q5R1H9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav7d-4Q5R1H9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-4Q5R1H9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-4Q5R1H9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-4Q5R1H9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-4Q5R1H9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-4Q5R1H9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-4Q5R1H9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-4Q5R1H9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-4Q5R1H9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-4Q5R1H9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-4Q5R1H9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-4Q5R1H9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-4Q5R1H9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-4Q5R1H9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
Trav7d-4Q5R1H9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-4Q5R1H9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-4Q5R1H9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-4Q5R1H9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav7d-4Q5R1H9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-4Q5R1H9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-4Q5R1H9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-4Q5R1H9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-4Q5R1H9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-4Q5R1H9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-4Q5R1H9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-4Q5R1H9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-4Q5R1H9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav7d-4Q5R1H9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7d-4Q5R1H9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav7d-4Q5R1H9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7d-4Q5R1H9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7d-4Q5R1H9 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms