Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf20Q5DTM8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf20Q5DTM8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf20Q5DTM8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.31■■□□□ 1
Rnf20Q5DTM8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Rnf20Q5DTM8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rnf20Q5DTM8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf20Q5DTM8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.31■■□□□ 1
Rnf20Q5DTM8 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.31■■□□□ 1
Rnf20Q5DTM8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf20Q5DTM8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf20Q5DTM8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf20Q5DTM8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.31■■□□□ 1
Rnf20Q5DTM8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf20Q5DTM8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf20Q5DTM8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.31■■□□□ 1
Rnf20Q5DTM8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf20Q5DTM8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf20Q5DTM8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf20Q5DTM8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.3■■□□□ 1
Rnf20Q5DTM8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rnf20Q5DTM8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf20Q5DTM8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rnf20Q5DTM8 Rarb-207ENSMUST00000225921 2756 ntBASIC21.3■■□□□ 1
Rnf20Q5DTM8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.3■■□□□ 1
Rnf20Q5DTM8 Zfp783-201ENSMUST00000095946 670 ntBASIC21.3■■□□□ 1
Rnf20Q5DTM8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rnf20Q5DTM8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.3■■□□□ 1
Rnf20Q5DTM8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf20Q5DTM8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf20Q5DTM8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf20Q5DTM8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.29■■□□□ 1
Rnf20Q5DTM8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rnf20Q5DTM8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf20Q5DTM8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf20Q5DTM8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf20Q5DTM8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rnf20Q5DTM8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf20Q5DTM8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf20Q5DTM8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Rnf20Q5DTM8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf20Q5DTM8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Rnf20Q5DTM8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf20Q5DTM8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.28■■□□□ 1
Rnf20Q5DTM8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rnf20Q5DTM8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.28■■□□□ 1
Rnf20Q5DTM8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.28■■□□□ 1
Rnf20Q5DTM8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.28■■□□□ 1
Rnf20Q5DTM8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf20Q5DTM8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rnf20Q5DTM8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.28■■□□□ 1
Rnf20Q5DTM8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf20Q5DTM8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf20Q5DTM8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf20Q5DTM8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.27■■□□□ 1
Rnf20Q5DTM8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf20Q5DTM8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.27■■□□□ 1
Rnf20Q5DTM8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Rnf20Q5DTM8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf20Q5DTM8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf20Q5DTM8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Rnf20Q5DTM8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Rnf20Q5DTM8 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.27■■□□□ 1
Rnf20Q5DTM8 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.27■■□□□ 1
Rnf20Q5DTM8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf20Q5DTM8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf20Q5DTM8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf20Q5DTM8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf20Q5DTM8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf20Q5DTM8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf20Q5DTM8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.27■□□□□ 0.99
Rnf20Q5DTM8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf20Q5DTM8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf20Q5DTM8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf20Q5DTM8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf20Q5DTM8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.26■□□□□ 0.99
Rnf20Q5DTM8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf20Q5DTM8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf20Q5DTM8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf20Q5DTM8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.26■□□□□ 0.99
Rnf20Q5DTM8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf20Q5DTM8 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.26■□□□□ 0.99
Rnf20Q5DTM8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf20Q5DTM8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf20Q5DTM8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf20Q5DTM8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf20Q5DTM8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf20Q5DTM8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf20Q5DTM8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.25■□□□□ 0.99
Rnf20Q5DTM8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf20Q5DTM8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf20Q5DTM8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf20Q5DTM8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf20Q5DTM8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf20Q5DTM8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf20Q5DTM8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf20Q5DTM8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Rnf20Q5DTM8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf20Q5DTM8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf20Q5DTM8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms