Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Urb1Q571H0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.43■□□□□ 0.22
Urb1Q571H0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Urb1Q571H0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Urb1Q571H0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Urb1Q571H0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Urb1Q571H0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Urb1Q571H0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Urb1Q571H0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Urb1Q571H0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.42■□□□□ 0.22
Urb1Q571H0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Urb1Q571H0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Urb1Q571H0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Urb1Q571H0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Urb1Q571H0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Urb1Q571H0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Urb1Q571H0 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.42■□□□□ 0.22
Urb1Q571H0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Urb1Q571H0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Urb1Q571H0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Urb1Q571H0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Urb1Q571H0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Urb1Q571H0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Urb1Q571H0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Urb1Q571H0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Urb1Q571H0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Urb1Q571H0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Urb1Q571H0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.42■□□□□ 0.22
Urb1Q571H0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Urb1Q571H0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Urb1Q571H0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Urb1Q571H0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Urb1Q571H0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Urb1Q571H0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Urb1Q571H0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Urb1Q571H0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Urb1Q571H0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Urb1Q571H0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Urb1Q571H0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Urb1Q571H0 Gm7461-201ENSMUST00000058918 827 ntBASIC16.41■□□□□ 0.22
Urb1Q571H0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Urb1Q571H0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Urb1Q571H0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Urb1Q571H0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Urb1Q571H0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.4■□□□□ 0.22
Urb1Q571H0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Urb1Q571H0 Gm38027-201ENSMUST00000192315 235 ntBASIC16.4■□□□□ 0.22
Urb1Q571H0 Gm38285-201ENSMUST00000192928 922 ntBASIC16.4■□□□□ 0.22
Urb1Q571H0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Urb1Q571H0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Urb1Q571H0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Urb1Q571H0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Urb1Q571H0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Urb1Q571H0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Urb1Q571H0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Urb1Q571H0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Urb1Q571H0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Urb1Q571H0 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.4■□□□□ 0.22
Urb1Q571H0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Urb1Q571H0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Urb1Q571H0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Urb1Q571H0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Urb1Q571H0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Urb1Q571H0 Gm14859-201ENSMUST00000117752 357 ntBASIC16.39■□□□□ 0.21
Urb1Q571H0 Gm18101-201ENSMUST00000215769 548 ntBASIC16.39■□□□□ 0.21
Urb1Q571H0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Urb1Q571H0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Urb1Q571H0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Urb1Q571H0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Urb1Q571H0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Urb1Q571H0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Urb1Q571H0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Urb1Q571H0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Urb1Q571H0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Urb1Q571H0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Urb1Q571H0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Urb1Q571H0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Urb1Q571H0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Urb1Q571H0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Urb1Q571H0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Urb1Q571H0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.38■□□□□ 0.21
Urb1Q571H0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Urb1Q571H0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Urb1Q571H0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Urb1Q571H0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Urb1Q571H0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.38■□□□□ 0.21
Urb1Q571H0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Urb1Q571H0 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.38■□□□□ 0.21
Urb1Q571H0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Urb1Q571H0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Urb1Q571H0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Urb1Q571H0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Urb1Q571H0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Urb1Q571H0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Urb1Q571H0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Urb1Q571H0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.38■□□□□ 0.21
Urb1Q571H0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Urb1Q571H0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Urb1Q571H0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Urb1Q571H0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms