Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rc3h1Q4VGL6 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.68■□□□□ 0.9
Rc3h1Q4VGL6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rc3h1Q4VGL6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rc3h1Q4VGL6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Rc3h1Q4VGL6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rc3h1Q4VGL6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rc3h1Q4VGL6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rc3h1Q4VGL6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.68■□□□□ 0.9
Rc3h1Q4VGL6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.68■□□□□ 0.9
Rc3h1Q4VGL6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rc3h1Q4VGL6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rc3h1Q4VGL6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rc3h1Q4VGL6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rc3h1Q4VGL6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rc3h1Q4VGL6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.67■□□□□ 0.9
Rc3h1Q4VGL6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rc3h1Q4VGL6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.67■□□□□ 0.9
Rc3h1Q4VGL6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rc3h1Q4VGL6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rc3h1Q4VGL6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rc3h1Q4VGL6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rc3h1Q4VGL6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rc3h1Q4VGL6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rc3h1Q4VGL6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rc3h1Q4VGL6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rc3h1Q4VGL6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rc3h1Q4VGL6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Rc3h1Q4VGL6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rc3h1Q4VGL6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rc3h1Q4VGL6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rc3h1Q4VGL6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rc3h1Q4VGL6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Rc3h1Q4VGL6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rc3h1Q4VGL6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rc3h1Q4VGL6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rc3h1Q4VGL6 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.66■□□□□ 0.9
Rc3h1Q4VGL6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.66■□□□□ 0.9
Rc3h1Q4VGL6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.66■□□□□ 0.9
Rc3h1Q4VGL6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rc3h1Q4VGL6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rc3h1Q4VGL6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rc3h1Q4VGL6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.66■□□□□ 0.9
Rc3h1Q4VGL6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rc3h1Q4VGL6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rc3h1Q4VGL6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rc3h1Q4VGL6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Rc3h1Q4VGL6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rc3h1Q4VGL6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rc3h1Q4VGL6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rc3h1Q4VGL6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rc3h1Q4VGL6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.65■□□□□ 0.9
Rc3h1Q4VGL6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rc3h1Q4VGL6 Gm43799-201ENSMUST00000201845 579 ntBASIC20.65■□□□□ 0.9
Rc3h1Q4VGL6 Gm3375-201ENSMUST00000203929 796 ntBASIC20.65■□□□□ 0.9
Rc3h1Q4VGL6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.65■□□□□ 0.9
Rc3h1Q4VGL6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rc3h1Q4VGL6 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.65■□□□□ 0.9
Rc3h1Q4VGL6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rc3h1Q4VGL6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Rc3h1Q4VGL6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rc3h1Q4VGL6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rc3h1Q4VGL6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rc3h1Q4VGL6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rc3h1Q4VGL6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rc3h1Q4VGL6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Rc3h1Q4VGL6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rc3h1Q4VGL6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rc3h1Q4VGL6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rc3h1Q4VGL6 Gm10517-202ENSMUST00000192970 758 ntBASIC20.64■□□□□ 0.89
Rc3h1Q4VGL6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rc3h1Q4VGL6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rc3h1Q4VGL6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rc3h1Q4VGL6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Rc3h1Q4VGL6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rc3h1Q4VGL6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rc3h1Q4VGL6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rc3h1Q4VGL6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rc3h1Q4VGL6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rc3h1Q4VGL6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rc3h1Q4VGL6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rc3h1Q4VGL6 Gm11643-201ENSMUST00000119578 864 ntBASIC20.63■□□□□ 0.89
Rc3h1Q4VGL6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rc3h1Q4VGL6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Rc3h1Q4VGL6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.63■□□□□ 0.89
Rc3h1Q4VGL6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.63■□□□□ 0.89
Rc3h1Q4VGL6 Timm23-208ENSMUST00000226683 750 ntBASIC20.63■□□□□ 0.89
Rc3h1Q4VGL6 Odf3b-204ENSMUST00000227834 930 ntBASIC20.63■□□□□ 0.89
Rc3h1Q4VGL6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rc3h1Q4VGL6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Rc3h1Q4VGL6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rc3h1Q4VGL6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rc3h1Q4VGL6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rc3h1Q4VGL6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rc3h1Q4VGL6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Rc3h1Q4VGL6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rc3h1Q4VGL6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rc3h1Q4VGL6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rc3h1Q4VGL6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rc3h1Q4VGL6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms