Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Pds5bQ4VA53 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Pds5bQ4VA53 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Pds5bQ4VA53 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Pds5bQ4VA53 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Pds5bQ4VA53 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Pds5bQ4VA53 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Pds5bQ4VA53 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Pds5bQ4VA53 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
Pds5bQ4VA53 Gm7063-201ENSMUST00000186840 981 ntBASIC31.35■■■□□ 2.61
Pds5bQ4VA53 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Pds5bQ4VA53 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Pds5bQ4VA53 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
Pds5bQ4VA53 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Pds5bQ4VA53 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC31.34■■■□□ 2.61
Pds5bQ4VA53 Vti1a-206ENSMUST00000225529 1244 ntBASIC31.34■■■□□ 2.61
Pds5bQ4VA53 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Pds5bQ4VA53 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Pds5bQ4VA53 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC31.34■■■□□ 2.61
Pds5bQ4VA53 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Pds5bQ4VA53 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Pds5bQ4VA53 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
Pds5bQ4VA53 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Pds5bQ4VA53 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
Pds5bQ4VA53 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Pds5bQ4VA53 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Pds5bQ4VA53 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC31.33■■■□□ 2.61
Pds5bQ4VA53 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
Pds5bQ4VA53 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Pds5bQ4VA53 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Pds5bQ4VA53 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.61
Pds5bQ4VA53 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.61
Pds5bQ4VA53 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Pds5bQ4VA53 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC31.32■■■□□ 2.6
Pds5bQ4VA53 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
Pds5bQ4VA53 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC31.32■■■□□ 2.6
Pds5bQ4VA53 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC31.32■■■□□ 2.6
Pds5bQ4VA53 AC161829.1-201ENSMUST00000220298 281 ntBASIC31.32■■■□□ 2.6
Pds5bQ4VA53 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC31.32■■■□□ 2.6
Pds5bQ4VA53 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC31.31■■■□□ 2.6
Pds5bQ4VA53 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Pds5bQ4VA53 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
Pds5bQ4VA53 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Pds5bQ4VA53 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Pds5bQ4VA53 Gm37820-201ENSMUST00000194021 2147 ntBASIC31.3■■■□□ 2.6
Pds5bQ4VA53 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Pds5bQ4VA53 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Pds5bQ4VA53 Gm15372-201ENSMUST00000120729 834 ntBASIC31.29■■■□□ 2.6
Pds5bQ4VA53 Gm1401-201ENSMUST00000122048 772 ntBASIC31.29■■■□□ 2.6
Pds5bQ4VA53 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
Pds5bQ4VA53 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
Pds5bQ4VA53 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Pds5bQ4VA53 Gm6190-201ENSMUST00000220683 1374 ntBASIC31.29■■■□□ 2.6
Pds5bQ4VA53 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC31.28■■■□□ 2.6
Pds5bQ4VA53 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC31.28■■■□□ 2.6
Pds5bQ4VA53 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
Pds5bQ4VA53 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Pds5bQ4VA53 Rps4l-201ENSMUST00000071745 943 ntBASIC31.28■■■□□ 2.6
Pds5bQ4VA53 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
Pds5bQ4VA53 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
Pds5bQ4VA53 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Pds5bQ4VA53 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Pds5bQ4VA53 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
Pds5bQ4VA53 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Pds5bQ4VA53 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Pds5bQ4VA53 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC31.27■■■□□ 2.6
Pds5bQ4VA53 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Pds5bQ4VA53 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.6
Pds5bQ4VA53 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC31.26■■■□□ 2.6
Pds5bQ4VA53 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Pds5bQ4VA53 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC31.25■■■□□ 2.59
Pds5bQ4VA53 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Pds5bQ4VA53 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Pds5bQ4VA53 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Pds5bQ4VA53 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC31.24■■■□□ 2.59
Pds5bQ4VA53 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
Pds5bQ4VA53 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
Pds5bQ4VA53 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pds5bQ4VA53 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pds5bQ4VA53 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Pds5bQ4VA53 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pds5bQ4VA53 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pds5bQ4VA53 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Pds5bQ4VA53 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC31.24■■■□□ 2.59
Pds5bQ4VA53 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC31.24■■■□□ 2.59
Pds5bQ4VA53 Gm8000-201ENSMUST00000188378 592 ntBASIC31.24■■■□□ 2.59
Pds5bQ4VA53 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC31.24■■■□□ 2.59
Pds5bQ4VA53 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
Pds5bQ4VA53 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC31.24■■■□□ 2.59
Pds5bQ4VA53 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
Pds5bQ4VA53 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Pds5bQ4VA53 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Pds5bQ4VA53 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Pds5bQ4VA53 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Pds5bQ4VA53 AC122351.1-201ENSMUST00000220467 126 ntBASIC31.23■■■□□ 2.59
Pds5bQ4VA53 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Pds5bQ4VA53 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
Pds5bQ4VA53 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Pds5bQ4VA53 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Pds5bQ4VA53 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms