Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ckap2Q3V1H1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ckap2Q3V1H1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ckap2Q3V1H1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ckap2Q3V1H1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.54■□□□□ 0.88
Ckap2Q3V1H1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ckap2Q3V1H1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ckap2Q3V1H1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.54■□□□□ 0.88
Ckap2Q3V1H1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ckap2Q3V1H1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ckap2Q3V1H1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Ckap2Q3V1H1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ckap2Q3V1H1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ckap2Q3V1H1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ckap2Q3V1H1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ckap2Q3V1H1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ckap2Q3V1H1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ckap2Q3V1H1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ckap2Q3V1H1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ckap2Q3V1H1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.52■□□□□ 0.88
Ckap2Q3V1H1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Ckap2Q3V1H1 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.52■□□□□ 0.88
Ckap2Q3V1H1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.52■□□□□ 0.88
Ckap2Q3V1H1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ckap2Q3V1H1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ckap2Q3V1H1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Ckap2Q3V1H1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ckap2Q3V1H1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ckap2Q3V1H1 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.52■□□□□ 0.87
Ckap2Q3V1H1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Ckap2Q3V1H1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ckap2Q3V1H1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ckap2Q3V1H1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ckap2Q3V1H1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ckap2Q3V1H1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ckap2Q3V1H1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Ckap2Q3V1H1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ckap2Q3V1H1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ckap2Q3V1H1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ckap2Q3V1H1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.51■□□□□ 0.87
Ckap2Q3V1H1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ckap2Q3V1H1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.51■□□□□ 0.87
Ckap2Q3V1H1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ckap2Q3V1H1 Gm18025-201ENSMUST00000221733 862 ntBASIC20.51■□□□□ 0.87
Ckap2Q3V1H1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.51■□□□□ 0.87
Ckap2Q3V1H1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ckap2Q3V1H1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ckap2Q3V1H1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ckap2Q3V1H1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ckap2Q3V1H1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ckap2Q3V1H1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ckap2Q3V1H1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ckap2Q3V1H1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ckap2Q3V1H1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ckap2Q3V1H1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ckap2Q3V1H1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.5■□□□□ 0.87
Ckap2Q3V1H1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ckap2Q3V1H1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ckap2Q3V1H1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.5■□□□□ 0.87
Ckap2Q3V1H1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ckap2Q3V1H1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ckap2Q3V1H1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ckap2Q3V1H1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ckap2Q3V1H1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ckap2Q3V1H1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ckap2Q3V1H1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.49■□□□□ 0.87
Ckap2Q3V1H1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
Ckap2Q3V1H1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ckap2Q3V1H1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ckap2Q3V1H1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.49■□□□□ 0.87
Ckap2Q3V1H1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ckap2Q3V1H1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ckap2Q3V1H1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ckap2Q3V1H1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ckap2Q3V1H1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ckap2Q3V1H1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ckap2Q3V1H1 Gm13401-201ENSMUST00000117074 291 ntBASIC20.48■□□□□ 0.87
Ckap2Q3V1H1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms