Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim80Q3V061 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim80Q3V061 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim80Q3V061 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim80Q3V061 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim80Q3V061 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim80Q3V061 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim80Q3V061 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim80Q3V061 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim80Q3V061 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim80Q3V061 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trim80Q3V061 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim80Q3V061 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim80Q3V061 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim80Q3V061 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.43■□□□□ 0.54
Trim80Q3V061 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.43■□□□□ 0.54
Trim80Q3V061 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim80Q3V061 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trim80Q3V061 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trim80Q3V061 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.43■□□□□ 0.54
Trim80Q3V061 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim80Q3V061 Gm9988-201ENSMUST00000069786 435 ntBASIC18.43■□□□□ 0.54
Trim80Q3V061 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim80Q3V061 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim80Q3V061 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim80Q3V061 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Trim80Q3V061 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim80Q3V061 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim80Q3V061 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim80Q3V061 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim80Q3V061 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim80Q3V061 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim80Q3V061 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim80Q3V061 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim80Q3V061 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Trim80Q3V061 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim80Q3V061 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim80Q3V061 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.42■□□□□ 0.54
Trim80Q3V061 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim80Q3V061 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim80Q3V061 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim80Q3V061 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim80Q3V061 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim80Q3V061 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim80Q3V061 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim80Q3V061 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim80Q3V061 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim80Q3V061 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim80Q3V061 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim80Q3V061 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim80Q3V061 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim80Q3V061 Gm13234-201ENSMUST00000120010 747 ntBASIC18.41■□□□□ 0.54
Trim80Q3V061 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim80Q3V061 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.41■□□□□ 0.54
Trim80Q3V061 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim80Q3V061 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim80Q3V061 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim80Q3V061 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim80Q3V061 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.41■□□□□ 0.54
Trim80Q3V061 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim80Q3V061 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim80Q3V061 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim80Q3V061 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Trim80Q3V061 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim80Q3V061 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim80Q3V061 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim80Q3V061 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim80Q3V061 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim80Q3V061 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trim80Q3V061 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim80Q3V061 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim80Q3V061 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim80Q3V061 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim80Q3V061 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.4■□□□□ 0.54
Trim80Q3V061 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trim80Q3V061 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim80Q3V061 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim80Q3V061 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim80Q3V061 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim80Q3V061 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim80Q3V061 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim80Q3V061 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim80Q3V061 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim80Q3V061 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim80Q3V061 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trim80Q3V061 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim80Q3V061 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim80Q3V061 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim80Q3V061 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.39■□□□□ 0.53
Trim80Q3V061 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim80Q3V061 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trim80Q3V061 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim80Q3V061 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim80Q3V061 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim80Q3V061 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.38■□□□□ 0.53
Trim80Q3V061 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trim80Q3V061 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trim80Q3V061 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim80Q3V061 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim80Q3V061 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms