Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf223Q3UV31 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf223Q3UV31 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf223Q3UV31 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf223Q3UV31 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf223Q3UV31 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf223Q3UV31 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf223Q3UV31 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf223Q3UV31 Gm11643-201ENSMUST00000119578 864 ntBASIC17.35■□□□□ 0.37
Rnf223Q3UV31 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf223Q3UV31 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.35■□□□□ 0.37
Rnf223Q3UV31 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.35■□□□□ 0.37
Rnf223Q3UV31 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf223Q3UV31 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rnf223Q3UV31 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf223Q3UV31 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf223Q3UV31 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf223Q3UV31 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf223Q3UV31 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf223Q3UV31 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf223Q3UV31 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf223Q3UV31 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf223Q3UV31 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf223Q3UV31 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf223Q3UV31 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rnf223Q3UV31 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rnf223Q3UV31 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf223Q3UV31 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rnf223Q3UV31 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Rnf223Q3UV31 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf223Q3UV31 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf223Q3UV31 Gm21814-202ENSMUST00000203277 873 ntBASIC17.34■□□□□ 0.37
Rnf223Q3UV31 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf223Q3UV31 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.34■□□□□ 0.37
Rnf223Q3UV31 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.34■□□□□ 0.37
Rnf223Q3UV31 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf223Q3UV31 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf223Q3UV31 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf223Q3UV31 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf223Q3UV31 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf223Q3UV31 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf223Q3UV31 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf223Q3UV31 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf223Q3UV31 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf223Q3UV31 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf223Q3UV31 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf223Q3UV31 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf223Q3UV31 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf223Q3UV31 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Rnf223Q3UV31 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf223Q3UV31 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf223Q3UV31 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf223Q3UV31 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Rnf223Q3UV31 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.33■□□□□ 0.36
Rnf223Q3UV31 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.33■□□□□ 0.36
Rnf223Q3UV31 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Rnf223Q3UV31 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf223Q3UV31 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf223Q3UV31 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf223Q3UV31 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf223Q3UV31 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf223Q3UV31 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rnf223Q3UV31 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rnf223Q3UV31 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rnf223Q3UV31 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf223Q3UV31 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf223Q3UV31 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf223Q3UV31 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf223Q3UV31 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf223Q3UV31 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf223Q3UV31 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf223Q3UV31 Gm10517-202ENSMUST00000192970 758 ntBASIC17.32■□□□□ 0.36
Rnf223Q3UV31 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.32■□□□□ 0.36
Rnf223Q3UV31 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf223Q3UV31 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.32■□□□□ 0.36
Rnf223Q3UV31 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf223Q3UV31 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf223Q3UV31 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rnf223Q3UV31 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf223Q3UV31 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.31■□□□□ 0.36
Rnf223Q3UV31 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf223Q3UV31 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf223Q3UV31 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.31■□□□□ 0.36
Rnf223Q3UV31 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf223Q3UV31 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf223Q3UV31 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Rnf223Q3UV31 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.31■□□□□ 0.36
Rnf223Q3UV31 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf223Q3UV31 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.31■□□□□ 0.36
Rnf223Q3UV31 Timm23-208ENSMUST00000226683 750 ntBASIC17.31■□□□□ 0.36
Rnf223Q3UV31 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rnf223Q3UV31 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf223Q3UV31 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf223Q3UV31 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf223Q3UV31 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf223Q3UV31 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf223Q3UV31 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf223Q3UV31 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.3■□□□□ 0.36
Rnf223Q3UV31 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf223Q3UV31 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms