Protein–RNA interactions for Protein: Q3UTB7

Foxr1, Forkhead box protein R1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxr1Q3UTB7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Foxr1Q3UTB7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Foxr1Q3UTB7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Foxr1Q3UTB7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Foxr1Q3UTB7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Foxr1Q3UTB7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.21■□□□□ 0.51
Foxr1Q3UTB7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Foxr1Q3UTB7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.21■□□□□ 0.51
Foxr1Q3UTB7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Foxr1Q3UTB7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Foxr1Q3UTB7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Foxr1Q3UTB7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Foxr1Q3UTB7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Foxr1Q3UTB7 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.21■□□□□ 0.5
Foxr1Q3UTB7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Foxr1Q3UTB7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
Foxr1Q3UTB7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxr1Q3UTB7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxr1Q3UTB7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxr1Q3UTB7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.2■□□□□ 0.5
Foxr1Q3UTB7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.2■□□□□ 0.5
Foxr1Q3UTB7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.2■□□□□ 0.5
Foxr1Q3UTB7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Foxr1Q3UTB7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Foxr1Q3UTB7 Gm3375-201ENSMUST00000203929 796 ntBASIC18.2■□□□□ 0.5
Foxr1Q3UTB7 Gm30025-201ENSMUST00000218555 728 ntBASIC18.2■□□□□ 0.5
Foxr1Q3UTB7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxr1Q3UTB7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Foxr1Q3UTB7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Foxr1Q3UTB7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxr1Q3UTB7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Foxr1Q3UTB7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxr1Q3UTB7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxr1Q3UTB7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxr1Q3UTB7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxr1Q3UTB7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxr1Q3UTB7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxr1Q3UTB7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxr1Q3UTB7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxr1Q3UTB7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxr1Q3UTB7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxr1Q3UTB7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxr1Q3UTB7 Gm10517-202ENSMUST00000192970 758 ntBASIC18.19■□□□□ 0.5
Foxr1Q3UTB7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Foxr1Q3UTB7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.19■□□□□ 0.5
Foxr1Q3UTB7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxr1Q3UTB7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Foxr1Q3UTB7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxr1Q3UTB7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Foxr1Q3UTB7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Foxr1Q3UTB7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Foxr1Q3UTB7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxr1Q3UTB7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxr1Q3UTB7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxr1Q3UTB7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Foxr1Q3UTB7 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.18■□□□□ 0.5
Foxr1Q3UTB7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxr1Q3UTB7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxr1Q3UTB7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxr1Q3UTB7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxr1Q3UTB7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Foxr1Q3UTB7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxr1Q3UTB7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxr1Q3UTB7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxr1Q3UTB7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxr1Q3UTB7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Foxr1Q3UTB7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Foxr1Q3UTB7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxr1Q3UTB7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxr1Q3UTB7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxr1Q3UTB7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Foxr1Q3UTB7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.17■□□□□ 0.5
Foxr1Q3UTB7 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.17■□□□□ 0.5
Foxr1Q3UTB7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Foxr1Q3UTB7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxr1Q3UTB7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Foxr1Q3UTB7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxr1Q3UTB7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxr1Q3UTB7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Foxr1Q3UTB7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxr1Q3UTB7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxr1Q3UTB7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Foxr1Q3UTB7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxr1Q3UTB7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxr1Q3UTB7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxr1Q3UTB7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.16■□□□□ 0.5
Foxr1Q3UTB7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.16■□□□□ 0.5
Foxr1Q3UTB7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Foxr1Q3UTB7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.16■□□□□ 0.5
Foxr1Q3UTB7 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.16■□□□□ 0.5
Foxr1Q3UTB7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.16■□□□□ 0.5
Foxr1Q3UTB7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxr1Q3UTB7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Foxr1Q3UTB7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Foxr1Q3UTB7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Foxr1Q3UTB7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Foxr1Q3UTB7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Foxr1Q3UTB7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Foxr1Q3UTB7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.15■□□□□ 0.5
Foxr1Q3UTB7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms