Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.32■■□□□ 1
SfswapQ3USH5 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.32■■□□□ 1
SfswapQ3USH5 Gm9987-201ENSMUST00000069768 567 ntBASIC21.32■■□□□ 1
SfswapQ3USH5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SfswapQ3USH5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SfswapQ3USH5 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SfswapQ3USH5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.31■■□□□ 1
SfswapQ3USH5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SfswapQ3USH5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SfswapQ3USH5 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.31■■□□□ 1
SfswapQ3USH5 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SfswapQ3USH5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SfswapQ3USH5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.31■■□□□ 1
SfswapQ3USH5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SfswapQ3USH5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SfswapQ3USH5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SfswapQ3USH5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SfswapQ3USH5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SfswapQ3USH5 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SfswapQ3USH5 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.3■■□□□ 1
SfswapQ3USH5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.3■■□□□ 1
SfswapQ3USH5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SfswapQ3USH5 Gm43799-201ENSMUST00000201845 579 ntBASIC21.3■■□□□ 1
SfswapQ3USH5 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SfswapQ3USH5 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SfswapQ3USH5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC21.3■■□□□ 1
SfswapQ3USH5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.3■■□□□ 1
SfswapQ3USH5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.3■■□□□ 1
SfswapQ3USH5 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.29■■□□□ 1
SfswapQ3USH5 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC21.29■■□□□ 1
SfswapQ3USH5 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SfswapQ3USH5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SfswapQ3USH5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.29■■□□□ 1
SfswapQ3USH5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SfswapQ3USH5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.29■■□□□ 1
SfswapQ3USH5 Gm21814-202ENSMUST00000203277 873 ntBASIC21.29■■□□□ 1
SfswapQ3USH5 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SfswapQ3USH5 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SfswapQ3USH5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SfswapQ3USH5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
SfswapQ3USH5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.28■■□□□ 1
SfswapQ3USH5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
SfswapQ3USH5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC21.28■■□□□ 1
SfswapQ3USH5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SfswapQ3USH5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SfswapQ3USH5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SfswapQ3USH5 Gm7977-201ENSMUST00000193787 748 ntBASIC21.28■■□□□ 1
SfswapQ3USH5 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC21.28■■□□□ 1
SfswapQ3USH5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SfswapQ3USH5 Gm30025-201ENSMUST00000218555 728 ntBASIC21.28■■□□□ 1
SfswapQ3USH5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SfswapQ3USH5 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SfswapQ3USH5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SfswapQ3USH5 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
SfswapQ3USH5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SfswapQ3USH5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SfswapQ3USH5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SfswapQ3USH5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SfswapQ3USH5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SfswapQ3USH5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SfswapQ3USH5 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.27■■□□□ 1
SfswapQ3USH5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.27■■□□□ 1
SfswapQ3USH5 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.27■■□□□ 1
SfswapQ3USH5 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.27■■□□□ 1
SfswapQ3USH5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC21.27■■□□□ 1
SfswapQ3USH5 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.27■■□□□ 1
SfswapQ3USH5 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.27■■□□□ 1
SfswapQ3USH5 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SfswapQ3USH5 Iqck-206ENSMUST00000208658 2891 ntBASIC21.26■□□□□ 0.99
SfswapQ3USH5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SfswapQ3USH5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SfswapQ3USH5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SfswapQ3USH5 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SfswapQ3USH5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SfswapQ3USH5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SfswapQ3USH5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SfswapQ3USH5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SfswapQ3USH5 Timm23-208ENSMUST00000226683 750 ntBASIC21.26■□□□□ 0.99
SfswapQ3USH5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SfswapQ3USH5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SfswapQ3USH5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.25■□□□□ 0.99
SfswapQ3USH5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SfswapQ3USH5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC21.25■□□□□ 0.99
SfswapQ3USH5 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SfswapQ3USH5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SfswapQ3USH5 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SfswapQ3USH5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SfswapQ3USH5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SfswapQ3USH5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SfswapQ3USH5 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SfswapQ3USH5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SfswapQ3USH5 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SfswapQ3USH5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SfswapQ3USH5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SfswapQ3USH5 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SfswapQ3USH5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SfswapQ3USH5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SfswapQ3USH5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SfswapQ3USH5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SfswapQ3USH5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms