Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Arhgef40Q3UPH7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Arhgef40Q3UPH7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Arhgef40Q3UPH7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Arhgef40Q3UPH7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Arhgef40Q3UPH7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Arhgef40Q3UPH7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Arhgef40Q3UPH7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Arhgef40Q3UPH7 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC26.46■■□□□ 1.83
Arhgef40Q3UPH7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Arhgef40Q3UPH7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Arhgef40Q3UPH7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Arhgef40Q3UPH7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Arhgef40Q3UPH7 Gm10418-201ENSMUST00000100943 576 ntBASIC26.45■■□□□ 1.83
Arhgef40Q3UPH7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Arhgef40Q3UPH7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Arhgef40Q3UPH7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC26.45■■□□□ 1.83
Arhgef40Q3UPH7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC26.45■■□□□ 1.83
Arhgef40Q3UPH7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.83
Arhgef40Q3UPH7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Arhgef40Q3UPH7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC26.44■■□□□ 1.82
Arhgef40Q3UPH7 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Arhgef40Q3UPH7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Arhgef40Q3UPH7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Arhgef40Q3UPH7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Arhgef40Q3UPH7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
Arhgef40Q3UPH7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Arhgef40Q3UPH7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Arhgef40Q3UPH7 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC26.44■■□□□ 1.82
Arhgef40Q3UPH7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Arhgef40Q3UPH7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Arhgef40Q3UPH7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Arhgef40Q3UPH7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Arhgef40Q3UPH7 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC26.43■■□□□ 1.82
Arhgef40Q3UPH7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Arhgef40Q3UPH7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC26.43■■□□□ 1.82
Arhgef40Q3UPH7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
Arhgef40Q3UPH7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
Arhgef40Q3UPH7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Arhgef40Q3UPH7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Arhgef40Q3UPH7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Arhgef40Q3UPH7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC26.42■■□□□ 1.82
Arhgef40Q3UPH7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
Arhgef40Q3UPH7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
Arhgef40Q3UPH7 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC26.42■■□□□ 1.82
Arhgef40Q3UPH7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Arhgef40Q3UPH7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
Arhgef40Q3UPH7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Arhgef40Q3UPH7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Arhgef40Q3UPH7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC26.41■■□□□ 1.82
Arhgef40Q3UPH7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Arhgef40Q3UPH7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Arhgef40Q3UPH7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Arhgef40Q3UPH7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Arhgef40Q3UPH7 Notumos-201ENSMUST00000151998 2659 ntBASIC26.4■■□□□ 1.82
Arhgef40Q3UPH7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Arhgef40Q3UPH7 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC26.4■■□□□ 1.82
Arhgef40Q3UPH7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Arhgef40Q3UPH7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Arhgef40Q3UPH7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Arhgef40Q3UPH7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Arhgef40Q3UPH7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Arhgef40Q3UPH7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Arhgef40Q3UPH7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Arhgef40Q3UPH7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Arhgef40Q3UPH7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Arhgef40Q3UPH7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Arhgef40Q3UPH7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Arhgef40Q3UPH7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Arhgef40Q3UPH7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
Arhgef40Q3UPH7 AC130713.1-201ENSMUST00000228853 1096 ntBASIC26.39■■□□□ 1.82
Arhgef40Q3UPH7 Gm7461-201ENSMUST00000058918 827 ntBASIC26.39■■□□□ 1.82
Arhgef40Q3UPH7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Arhgef40Q3UPH7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Arhgef40Q3UPH7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Arhgef40Q3UPH7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC26.39■■□□□ 1.81
Arhgef40Q3UPH7 Gm9731-201ENSMUST00000209480 747 ntBASIC26.39■■□□□ 1.81
Arhgef40Q3UPH7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Arhgef40Q3UPH7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Arhgef40Q3UPH7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Arhgef40Q3UPH7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Arhgef40Q3UPH7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC26.38■■□□□ 1.81
Arhgef40Q3UPH7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Arhgef40Q3UPH7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Arhgef40Q3UPH7 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Arhgef40Q3UPH7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Arhgef40Q3UPH7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Arhgef40Q3UPH7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC26.38■■□□□ 1.81
Arhgef40Q3UPH7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Arhgef40Q3UPH7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Arhgef40Q3UPH7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Arhgef40Q3UPH7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Arhgef40Q3UPH7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Arhgef40Q3UPH7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC26.37■■□□□ 1.81
Arhgef40Q3UPH7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Arhgef40Q3UPH7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Arhgef40Q3UPH7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Arhgef40Q3UPH7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
Arhgef40Q3UPH7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Arhgef40Q3UPH7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms