Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Naf1Q3UMQ8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Naf1Q3UMQ8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.16■□□□□ 0.5
Naf1Q3UMQ8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Naf1Q3UMQ8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.16■□□□□ 0.5
Naf1Q3UMQ8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Naf1Q3UMQ8 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.16■□□□□ 0.5
Naf1Q3UMQ8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Naf1Q3UMQ8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Naf1Q3UMQ8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Naf1Q3UMQ8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Naf1Q3UMQ8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Naf1Q3UMQ8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Naf1Q3UMQ8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Naf1Q3UMQ8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Naf1Q3UMQ8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Naf1Q3UMQ8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Naf1Q3UMQ8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Naf1Q3UMQ8 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.15■□□□□ 0.5
Naf1Q3UMQ8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.15■□□□□ 0.5
Naf1Q3UMQ8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Naf1Q3UMQ8 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.15■□□□□ 0.5
Naf1Q3UMQ8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.15■□□□□ 0.5
Naf1Q3UMQ8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Naf1Q3UMQ8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Naf1Q3UMQ8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.15■□□□□ 0.5
Naf1Q3UMQ8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Naf1Q3UMQ8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Naf1Q3UMQ8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Naf1Q3UMQ8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Naf1Q3UMQ8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Naf1Q3UMQ8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
Naf1Q3UMQ8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Naf1Q3UMQ8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Naf1Q3UMQ8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.14■□□□□ 0.49
Naf1Q3UMQ8 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.14■□□□□ 0.49
Naf1Q3UMQ8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Naf1Q3UMQ8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Naf1Q3UMQ8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Naf1Q3UMQ8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Naf1Q3UMQ8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Naf1Q3UMQ8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Naf1Q3UMQ8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.13■□□□□ 0.49
Naf1Q3UMQ8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Naf1Q3UMQ8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Naf1Q3UMQ8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Naf1Q3UMQ8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Naf1Q3UMQ8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Naf1Q3UMQ8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Naf1Q3UMQ8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Naf1Q3UMQ8 Gm12382-201ENSMUST00000122005 922 ntBASIC18.13■□□□□ 0.49
Naf1Q3UMQ8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.13■□□□□ 0.49
Naf1Q3UMQ8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Naf1Q3UMQ8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Naf1Q3UMQ8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Naf1Q3UMQ8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Naf1Q3UMQ8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Naf1Q3UMQ8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Naf1Q3UMQ8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Naf1Q3UMQ8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Naf1Q3UMQ8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Naf1Q3UMQ8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Naf1Q3UMQ8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Naf1Q3UMQ8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Naf1Q3UMQ8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Naf1Q3UMQ8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Naf1Q3UMQ8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Naf1Q3UMQ8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Naf1Q3UMQ8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Naf1Q3UMQ8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Naf1Q3UMQ8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Naf1Q3UMQ8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Naf1Q3UMQ8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.11■□□□□ 0.49
Naf1Q3UMQ8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Naf1Q3UMQ8 Gm21814-202ENSMUST00000203277 873 ntBASIC18.11■□□□□ 0.49
Naf1Q3UMQ8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Naf1Q3UMQ8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Naf1Q3UMQ8 Gm5417-201ENSMUST00000079706 384 ntBASIC18.11■□□□□ 0.49
Naf1Q3UMQ8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Naf1Q3UMQ8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Naf1Q3UMQ8 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.11■□□□□ 0.49
Naf1Q3UMQ8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Naf1Q3UMQ8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Naf1Q3UMQ8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Naf1Q3UMQ8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Naf1Q3UMQ8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Naf1Q3UMQ8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Naf1Q3UMQ8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.1■□□□□ 0.49
Naf1Q3UMQ8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.1■□□□□ 0.49
Naf1Q3UMQ8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Naf1Q3UMQ8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Naf1Q3UMQ8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Naf1Q3UMQ8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Naf1Q3UMQ8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Naf1Q3UMQ8 Tgds-204ENSMUST00000228543 1594 ntBASIC18.09■□□□□ 0.49
Naf1Q3UMQ8 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.09■□□□□ 0.49
Naf1Q3UMQ8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Naf1Q3UMQ8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Naf1Q3UMQ8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Naf1Q3UMQ8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms