Protein–RNA interactions for Protein: Q3UKJ7

Smu1, WD40 repeat-containing protein SMU1, mousemouse

Known RBP Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smu1Q3UKJ7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smu1Q3UKJ7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smu1Q3UKJ7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smu1Q3UKJ7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.15■□□□□ 0.34
Smu1Q3UKJ7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smu1Q3UKJ7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.15■□□□□ 0.34
Smu1Q3UKJ7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.15■□□□□ 0.34
Smu1Q3UKJ7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smu1Q3UKJ7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smu1Q3UKJ7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smu1Q3UKJ7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smu1Q3UKJ7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smu1Q3UKJ7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smu1Q3UKJ7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smu1Q3UKJ7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smu1Q3UKJ7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smu1Q3UKJ7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.15■□□□□ 0.34
Smu1Q3UKJ7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Smu1Q3UKJ7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Smu1Q3UKJ7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Smu1Q3UKJ7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smu1Q3UKJ7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Smu1Q3UKJ7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smu1Q3UKJ7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.14■□□□□ 0.33
Smu1Q3UKJ7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.14■□□□□ 0.33
Smu1Q3UKJ7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smu1Q3UKJ7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Smu1Q3UKJ7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smu1Q3UKJ7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smu1Q3UKJ7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smu1Q3UKJ7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smu1Q3UKJ7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smu1Q3UKJ7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smu1Q3UKJ7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smu1Q3UKJ7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smu1Q3UKJ7 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.13■□□□□ 0.33
Smu1Q3UKJ7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smu1Q3UKJ7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Smu1Q3UKJ7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.13■□□□□ 0.33
Smu1Q3UKJ7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.13■□□□□ 0.33
Smu1Q3UKJ7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smu1Q3UKJ7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smu1Q3UKJ7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.13■□□□□ 0.33
Smu1Q3UKJ7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Smu1Q3UKJ7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smu1Q3UKJ7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smu1Q3UKJ7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smu1Q3UKJ7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Smu1Q3UKJ7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smu1Q3UKJ7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.12■□□□□ 0.33
Smu1Q3UKJ7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smu1Q3UKJ7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smu1Q3UKJ7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smu1Q3UKJ7 Idnk-204ENSMUST00000226010 1898 ntBASIC17.12■□□□□ 0.33
Smu1Q3UKJ7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smu1Q3UKJ7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Smu1Q3UKJ7 Gm18671-201ENSMUST00000214826 683 ntBASIC17.12■□□□□ 0.33
Smu1Q3UKJ7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smu1Q3UKJ7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smu1Q3UKJ7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Smu1Q3UKJ7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Smu1Q3UKJ7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smu1Q3UKJ7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smu1Q3UKJ7 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.12■□□□□ 0.33
Smu1Q3UKJ7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smu1Q3UKJ7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smu1Q3UKJ7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smu1Q3UKJ7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smu1Q3UKJ7 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.11■□□□□ 0.33
Smu1Q3UKJ7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smu1Q3UKJ7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smu1Q3UKJ7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smu1Q3UKJ7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smu1Q3UKJ7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.11■□□□□ 0.33
Smu1Q3UKJ7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smu1Q3UKJ7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.11■□□□□ 0.33
Smu1Q3UKJ7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smu1Q3UKJ7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smu1Q3UKJ7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.11■□□□□ 0.33
Smu1Q3UKJ7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smu1Q3UKJ7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smu1Q3UKJ7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.11■□□□□ 0.33
Smu1Q3UKJ7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.11■□□□□ 0.33
Smu1Q3UKJ7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Smu1Q3UKJ7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smu1Q3UKJ7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smu1Q3UKJ7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smu1Q3UKJ7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smu1Q3UKJ7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.1■□□□□ 0.33
Smu1Q3UKJ7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smu1Q3UKJ7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smu1Q3UKJ7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Smu1Q3UKJ7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smu1Q3UKJ7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smu1Q3UKJ7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smu1Q3UKJ7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smu1Q3UKJ7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
Smu1Q3UKJ7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smu1Q3UKJ7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Smu1Q3UKJ7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms