Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Snx27Q3UHD6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Snx27Q3UHD6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Snx27Q3UHD6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Snx27Q3UHD6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx27Q3UHD6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx27Q3UHD6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx27Q3UHD6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx27Q3UHD6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Snx27Q3UHD6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Snx27Q3UHD6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.34■□□□□ 0.69
Snx27Q3UHD6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx27Q3UHD6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Snx27Q3UHD6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx27Q3UHD6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.34■□□□□ 0.69
Snx27Q3UHD6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx27Q3UHD6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Snx27Q3UHD6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx27Q3UHD6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snx27Q3UHD6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Snx27Q3UHD6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Snx27Q3UHD6 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.33■□□□□ 0.69
Snx27Q3UHD6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Snx27Q3UHD6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Snx27Q3UHD6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Snx27Q3UHD6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Snx27Q3UHD6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Snx27Q3UHD6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Snx27Q3UHD6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Snx27Q3UHD6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Snx27Q3UHD6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Snx27Q3UHD6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Snx27Q3UHD6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Snx27Q3UHD6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Snx27Q3UHD6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Snx27Q3UHD6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Snx27Q3UHD6 Gm13401-201ENSMUST00000117074 291 ntBASIC19.32■□□□□ 0.68
Snx27Q3UHD6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Snx27Q3UHD6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Snx27Q3UHD6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Snx27Q3UHD6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Snx27Q3UHD6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Snx27Q3UHD6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.31■□□□□ 0.68
Snx27Q3UHD6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Snx27Q3UHD6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Snx27Q3UHD6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Snx27Q3UHD6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Snx27Q3UHD6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Snx27Q3UHD6 Gm10418-201ENSMUST00000100943 576 ntBASIC19.31■□□□□ 0.68
Snx27Q3UHD6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Snx27Q3UHD6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Snx27Q3UHD6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.31■□□□□ 0.68
Snx27Q3UHD6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Snx27Q3UHD6 Gm9987-201ENSMUST00000069768 567 ntBASIC19.31■□□□□ 0.68
Snx27Q3UHD6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Snx27Q3UHD6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Snx27Q3UHD6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Snx27Q3UHD6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Snx27Q3UHD6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snx27Q3UHD6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snx27Q3UHD6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Snx27Q3UHD6 Gm6433-201ENSMUST00000118634 875 ntBASIC19.3■□□□□ 0.68
Snx27Q3UHD6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.3■□□□□ 0.68
Snx27Q3UHD6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.3■□□□□ 0.68
Snx27Q3UHD6 Gm29791-202ENSMUST00000207888 369 ntBASIC19.3■□□□□ 0.68
Snx27Q3UHD6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snx27Q3UHD6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snx27Q3UHD6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Snx27Q3UHD6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Snx27Q3UHD6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snx27Q3UHD6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snx27Q3UHD6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Snx27Q3UHD6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Snx27Q3UHD6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Snx27Q3UHD6 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.29■□□□□ 0.68
Snx27Q3UHD6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx27Q3UHD6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx27Q3UHD6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Snx27Q3UHD6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.29■□□□□ 0.68
Snx27Q3UHD6 Gm12085-201ENSMUST00000119263 940 ntBASIC19.29■□□□□ 0.68
Snx27Q3UHD6 Gm11539-201ENSMUST00000119837 557 ntBASIC19.29■□□□□ 0.68
Snx27Q3UHD6 Gm13436-201ENSMUST00000120418 567 ntBASIC19.29■□□□□ 0.68
Snx27Q3UHD6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Snx27Q3UHD6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.29■□□□□ 0.68
Snx27Q3UHD6 Gm4974-201ENSMUST00000209974 875 ntBASIC19.29■□□□□ 0.68
Snx27Q3UHD6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.29■□□□□ 0.68
Snx27Q3UHD6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx27Q3UHD6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx27Q3UHD6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx27Q3UHD6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx27Q3UHD6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx27Q3UHD6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx27Q3UHD6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx27Q3UHD6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx27Q3UHD6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx27Q3UHD6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Snx27Q3UHD6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snx27Q3UHD6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.28■□□□□ 0.68
Snx27Q3UHD6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snx27Q3UHD6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms