Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Mir3081-201ENSMUST00000175305 84 ntBASIC21.31■■□□□ 1
Col5a2Q3U962 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
Col5a2Q3U962 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC21.31■■□□□ 1
Col5a2Q3U962 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col5a2Q3U962 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col5a2Q3U962 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.3■■□□□ 1
Col5a2Q3U962 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.3■■□□□ 1
Col5a2Q3U962 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Col5a2Q3U962 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.3■■□□□ 1
Col5a2Q3U962 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Col5a2Q3U962 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Col5a2Q3U962 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC21.3■■□□□ 1
Col5a2Q3U962 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
Col5a2Q3U962 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC21.3■■□□□ 1
Col5a2Q3U962 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col5a2Q3U962 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Col5a2Q3U962 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Col5a2Q3U962 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col5a2Q3U962 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.29■■□□□ 1
Col5a2Q3U962 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.29■■□□□ 1
Col5a2Q3U962 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col5a2Q3U962 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col5a2Q3U962 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Col5a2Q3U962 Gm24589-201ENSMUST00000116692 94 ntBASIC21.29■■□□□ 1
Col5a2Q3U962 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.29■■□□□ 1
Col5a2Q3U962 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC21.29■■□□□ 1
Col5a2Q3U962 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col5a2Q3U962 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.29■■□□□ 1
Col5a2Q3U962 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Col5a2Q3U962 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Col5a2Q3U962 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Col5a2Q3U962 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.29■■□□□ 1
Col5a2Q3U962 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Col5a2Q3U962 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.29■■□□□ 1
Col5a2Q3U962 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.29■■□□□ 1
Col5a2Q3U962 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col5a2Q3U962 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col5a2Q3U962 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Col5a2Q3U962 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC21.28■■□□□ 1
Col5a2Q3U962 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Col5a2Q3U962 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Col5a2Q3U962 Gm7213-201ENSMUST00000215977 950 ntBASIC21.28■■□□□ 1
Col5a2Q3U962 AC164629.2-201ENSMUST00000217916 270 ntBASIC21.28■■□□□ 1
Col5a2Q3U962 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col5a2Q3U962 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.28■■□□□ 1
Col5a2Q3U962 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.28■■□□□ 1
Col5a2Q3U962 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col5a2Q3U962 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.28■■□□□ 1
Col5a2Q3U962 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.28■■□□□ 1
Col5a2Q3U962 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.28■■□□□ 1
Col5a2Q3U962 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col5a2Q3U962 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC21.27■■□□□ 1
Col5a2Q3U962 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Col5a2Q3U962 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col5a2Q3U962 Mzt1-203ENSMUST00000227948 952 ntBASIC21.27■■□□□ 1
Col5a2Q3U962 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC21.27■■□□□ 1
Col5a2Q3U962 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.27■■□□□ 1
Col5a2Q3U962 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col5a2Q3U962 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col5a2Q3U962 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Col5a2Q3U962 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col5a2Q3U962 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Col5a2Q3U962 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Col5a2Q3U962 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Col5a2Q3U962 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col5a2Q3U962 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col5a2Q3U962 Gm13401-201ENSMUST00000117074 291 ntBASIC21.26■□□□□ 0.99
Col5a2Q3U962 Gm11355-201ENSMUST00000121120 306 ntBASIC21.26■□□□□ 0.99
Col5a2Q3U962 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC21.26■□□□□ 0.99
Col5a2Q3U962 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC21.26■□□□□ 0.99
Col5a2Q3U962 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Col5a2Q3U962 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC21.26■□□□□ 0.99
Col5a2Q3U962 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col5a2Q3U962 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Col5a2Q3U962 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col5a2Q3U962 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col5a2Q3U962 Gm9731-201ENSMUST00000209480 747 ntBASIC21.26■□□□□ 0.99
Col5a2Q3U962 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col5a2Q3U962 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col5a2Q3U962 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Col5a2Q3U962 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col5a2Q3U962 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col5a2Q3U962 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col5a2Q3U962 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col5a2Q3U962 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Col5a2Q3U962 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col5a2Q3U962 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Col5a2Q3U962 Gm11860-201ENSMUST00000122346 1010 ntBASIC21.25■□□□□ 0.99
Col5a2Q3U962 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC21.25■□□□□ 0.99
Col5a2Q3U962 Gm43514-201ENSMUST00000198852 424 ntBASIC21.25■□□□□ 0.99
Col5a2Q3U962 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col5a2Q3U962 Spr-ps1-201ENSMUST00000089584 605 ntBASIC21.25■□□□□ 0.99
Col5a2Q3U962 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Col5a2Q3U962 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col5a2Q3U962 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col5a2Q3U962 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Col5a2Q3U962 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col5a2Q3U962 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col5a2Q3U962 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col5a2Q3U962 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms